nginx-sso/vendor/google.golang.org/genproto/googleapis/genomics/v1/variants.pb.go

// Code generated by protoc-gen-go. DO NOT EDIT.
// source: google/genomics/v1/variants.proto

package genomics // import "google.golang.org/genproto/googleapis/genomics/v1"

import proto "github.com/golang/protobuf/proto"
import fmt "fmt"
import math "math"
import empty "github.com/golang/protobuf/ptypes/empty"
import _struct "github.com/golang/protobuf/ptypes/struct"
import _ "google.golang.org/genproto/googleapis/api/annotations"
import longrunning "google.golang.org/genproto/googleapis/longrunning"
import field_mask "google.golang.org/genproto/protobuf/field_mask"

import (
	context "golang.org/x/net/context"
	grpc "google.golang.org/grpc"
)

// Reference imports to suppress errors if they are not otherwise used.
var _ = proto.Marshal
var _ = fmt.Errorf
var _ = math.Inf

// This is a compile-time assertion to ensure that this generated file
// is compatible with the proto package it is being compiled against.
// A compilation error at this line likely means your copy of the
// proto package needs to be updated.
const _ = proto.ProtoPackageIsVersion2 // please upgrade the proto package

// Operations to be performed during import on Variant info fields.
// These operations are set for each info field in the info_merge_config
// map of ImportVariantsRequest, which is plumbed down to the
// MergeVariantRequests generated by the import job.
type InfoMergeOperation int32

const (
	InfoMergeOperation_INFO_MERGE_OPERATION_UNSPECIFIED InfoMergeOperation = 0
	// By default, Variant info fields are persisted if the Variant doesn't
	// already exist in the variantset.  If the Variant is equivalent to a
	// Variant already in the variantset, the incoming Variant's info field
	// is ignored in favor of that of the already persisted Variant.
	InfoMergeOperation_IGNORE_NEW InfoMergeOperation = 1
	// This operation removes an info field from the incoming Variant
	// and persists this info field in each of the incoming Variant's Calls.
	InfoMergeOperation_MOVE_TO_CALLS InfoMergeOperation = 2
)

var InfoMergeOperation_name = map[int32]string{
	0: "INFO_MERGE_OPERATION_UNSPECIFIED",
	1: "IGNORE_NEW",
	2: "MOVE_TO_CALLS",
}
var InfoMergeOperation_value = map[string]int32{
	"INFO_MERGE_OPERATION_UNSPECIFIED": 0,
	"IGNORE_NEW":                       1,
	"MOVE_TO_CALLS":                    2,
}

func (x InfoMergeOperation) String() string {
	return proto.EnumName(InfoMergeOperation_name, int32(x))
}
func (InfoMergeOperation) EnumDescriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{0}
}

type VariantSetMetadata_Type int32

const (
	VariantSetMetadata_TYPE_UNSPECIFIED VariantSetMetadata_Type = 0
	VariantSetMetadata_INTEGER          VariantSetMetadata_Type = 1
	VariantSetMetadata_FLOAT            VariantSetMetadata_Type = 2
	VariantSetMetadata_FLAG             VariantSetMetadata_Type = 3
	VariantSetMetadata_CHARACTER        VariantSetMetadata_Type = 4
	VariantSetMetadata_STRING           VariantSetMetadata_Type = 5
)

var VariantSetMetadata_Type_name = map[int32]string{
	0: "TYPE_UNSPECIFIED",
	1: "INTEGER",
	2: "FLOAT",
	3: "FLAG",
	4: "CHARACTER",
	5: "STRING",
}
var VariantSetMetadata_Type_value = map[string]int32{
	"TYPE_UNSPECIFIED": 0,
	"INTEGER":          1,
	"FLOAT":            2,
	"FLAG":             3,
	"CHARACTER":        4,
	"STRING":           5,
}

func (x VariantSetMetadata_Type) String() string {
	return proto.EnumName(VariantSetMetadata_Type_name, int32(x))
}
func (VariantSetMetadata_Type) EnumDescriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{0, 0}
}

type ImportVariantsRequest_Format int32

const (
	ImportVariantsRequest_FORMAT_UNSPECIFIED ImportVariantsRequest_Format = 0
	// VCF (Variant Call Format). The VCF files may be gzip compressed. gVCF is
	// also supported.
	ImportVariantsRequest_FORMAT_VCF ImportVariantsRequest_Format = 1
	// Complete Genomics masterVarBeta format. The masterVarBeta files may
	// be bzip2 compressed.
	ImportVariantsRequest_FORMAT_COMPLETE_GENOMICS ImportVariantsRequest_Format = 2
)

var ImportVariantsRequest_Format_name = map[int32]string{
	0: "FORMAT_UNSPECIFIED",
	1: "FORMAT_VCF",
	2: "FORMAT_COMPLETE_GENOMICS",
}
var ImportVariantsRequest_Format_value = map[string]int32{
	"FORMAT_UNSPECIFIED":       0,
	"FORMAT_VCF":               1,
	"FORMAT_COMPLETE_GENOMICS": 2,
}

func (x ImportVariantsRequest_Format) String() string {
	return proto.EnumName(ImportVariantsRequest_Format_name, int32(x))
}
func (ImportVariantsRequest_Format) EnumDescriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{6, 0}
}

type ExportVariantSetRequest_Format int32

const (
	ExportVariantSetRequest_FORMAT_UNSPECIFIED ExportVariantSetRequest_Format = 0
	// Export the data to Google BigQuery.
	ExportVariantSetRequest_FORMAT_BIGQUERY ExportVariantSetRequest_Format = 1
)

var ExportVariantSetRequest_Format_name = map[int32]string{
	0: "FORMAT_UNSPECIFIED",
	1: "FORMAT_BIGQUERY",
}
var ExportVariantSetRequest_Format_value = map[string]int32{
	"FORMAT_UNSPECIFIED": 0,
	"FORMAT_BIGQUERY":    1,
}

func (x ExportVariantSetRequest_Format) String() string {
	return proto.EnumName(ExportVariantSetRequest_Format_name, int32(x))
}
func (ExportVariantSetRequest_Format) EnumDescriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{9, 0}
}

// Metadata describes a single piece of variant call metadata.
// These data include a top level key and either a single value string (value)
// or a list of key-value pairs (info.)
// Value and info are mutually exclusive.
type VariantSetMetadata struct {
	// The top-level key.
	Key string `protobuf:"bytes,1,opt,name=key,proto3" json:"key,omitempty"`
	// The value field for simple metadata
	Value string `protobuf:"bytes,2,opt,name=value,proto3" json:"value,omitempty"`
	// User-provided ID field, not enforced by this API.
	// Two or more pieces of structured metadata with identical
	// id and key fields are considered equivalent.
	Id string `protobuf:"bytes,4,opt,name=id,proto3" json:"id,omitempty"`
	// The type of data. Possible types include: Integer, Float,
	// Flag, Character, and String.
	Type VariantSetMetadata_Type `protobuf:"varint,5,opt,name=type,proto3,enum=google.genomics.v1.VariantSetMetadata_Type" json:"type,omitempty"`
	// The number of values that can be included in a field described by this
	// metadata.
	Number string `protobuf:"bytes,8,opt,name=number,proto3" json:"number,omitempty"`
	// A textual description of this metadata.
	Description string `protobuf:"bytes,7,opt,name=description,proto3" json:"description,omitempty"`
	// Remaining structured metadata key-value pairs. This must be of the form
	// map<string, string[]> (string key mapping to a list of string values).
	Info                 map[string]*_struct.ListValue `protobuf:"bytes,3,rep,name=info,proto3" json:"info,omitempty" protobuf_key:"bytes,1,opt,name=key,proto3" protobuf_val:"bytes,2,opt,name=value,proto3"`
	XXX_NoUnkeyedLiteral struct{}                      `json:"-"`
	XXX_unrecognized     []byte                        `json:"-"`
	XXX_sizecache        int32                         `json:"-"`
}

func (m *VariantSetMetadata) Reset()         { *m = VariantSetMetadata{} }
func (m *VariantSetMetadata) String() string { return proto.CompactTextString(m) }
func (*VariantSetMetadata) ProtoMessage()    {}
func (*VariantSetMetadata) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{0}
}
func (m *VariantSetMetadata) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_VariantSetMetadata.Unmarshal(m, b)
}
func (m *VariantSetMetadata) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_VariantSetMetadata.Marshal(b, m, deterministic)
}
func (dst *VariantSetMetadata) XXX_Merge(src proto.Message) {
	xxx_messageInfo_VariantSetMetadata.Merge(dst, src)
}
func (m *VariantSetMetadata) XXX_Size() int {
	return xxx_messageInfo_VariantSetMetadata.Size(m)
}
func (m *VariantSetMetadata) XXX_DiscardUnknown() {
	xxx_messageInfo_VariantSetMetadata.DiscardUnknown(m)
}

var xxx_messageInfo_VariantSetMetadata proto.InternalMessageInfo

func (m *VariantSetMetadata) GetKey() string {
	if m != nil {
		return m.Key
	}
	return ""
}

func (m *VariantSetMetadata) GetValue() string {
	if m != nil {
		return m.Value
	}
	return ""
}

func (m *VariantSetMetadata) GetId() string {
	if m != nil {
		return m.Id
	}
	return ""
}

func (m *VariantSetMetadata) GetType() VariantSetMetadata_Type {
	if m != nil {
		return m.Type
	}
	return VariantSetMetadata_TYPE_UNSPECIFIED
}

func (m *VariantSetMetadata) GetNumber() string {
	if m != nil {
		return m.Number
	}
	return ""
}

func (m *VariantSetMetadata) GetDescription() string {
	if m != nil {
		return m.Description
	}
	return ""
}

func (m *VariantSetMetadata) GetInfo() map[string]*_struct.ListValue {
	if m != nil {
		return m.Info
	}
	return nil
}

// A variant set is a collection of call sets and variants. It contains summary
// statistics of those contents. A variant set belongs to a dataset.
//
// For more genomics resource definitions, see [Fundamentals of Google
// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
type VariantSet struct {
	// The dataset to which this variant set belongs.
	DatasetId string `protobuf:"bytes,1,opt,name=dataset_id,json=datasetId,proto3" json:"dataset_id,omitempty"`
	// The server-generated variant set ID, unique across all variant sets.
	Id string `protobuf:"bytes,2,opt,name=id,proto3" json:"id,omitempty"`
	// The reference set to which the variant set is mapped. The reference set
	// describes the alignment provenance of the variant set, while the
	// `referenceBounds` describe the shape of the actual variant data. The
	// reference set's reference names are a superset of those found in the
	// `referenceBounds`.
	//
	// For example, given a variant set that is mapped to the GRCh38 reference set
	// and contains a single variant on reference 'X', `referenceBounds` would
	// contain only an entry for 'X', while the associated reference set
	// enumerates all possible references: '1', '2', 'X', 'Y', 'MT', etc.
	ReferenceSetId string `protobuf:"bytes,6,opt,name=reference_set_id,json=referenceSetId,proto3" json:"reference_set_id,omitempty"`
	// A list of all references used by the variants in a variant set
	// with associated coordinate upper bounds for each one.
	ReferenceBounds []*ReferenceBound `protobuf:"bytes,5,rep,name=reference_bounds,json=referenceBounds,proto3" json:"reference_bounds,omitempty"`
	// The metadata associated with this variant set.
	Metadata []*VariantSetMetadata `protobuf:"bytes,4,rep,name=metadata,proto3" json:"metadata,omitempty"`
	// User-specified, mutable name.
	Name string `protobuf:"bytes,7,opt,name=name,proto3" json:"name,omitempty"`
	// A textual description of this variant set.
	Description          string   `protobuf:"bytes,8,opt,name=description,proto3" json:"description,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *VariantSet) Reset()         { *m = VariantSet{} }
func (m *VariantSet) String() string { return proto.CompactTextString(m) }
func (*VariantSet) ProtoMessage()    {}
func (*VariantSet) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{1}
}
func (m *VariantSet) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_VariantSet.Unmarshal(m, b)
}
func (m *VariantSet) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_VariantSet.Marshal(b, m, deterministic)
}
func (dst *VariantSet) XXX_Merge(src proto.Message) {
	xxx_messageInfo_VariantSet.Merge(dst, src)
}
func (m *VariantSet) XXX_Size() int {
	return xxx_messageInfo_VariantSet.Size(m)
}
func (m *VariantSet) XXX_DiscardUnknown() {
	xxx_messageInfo_VariantSet.DiscardUnknown(m)
}

var xxx_messageInfo_VariantSet proto.InternalMessageInfo

func (m *VariantSet) GetDatasetId() string {
	if m != nil {
		return m.DatasetId
	}
	return ""
}

func (m *VariantSet) GetId() string {
	if m != nil {
		return m.Id
	}
	return ""
}

func (m *VariantSet) GetReferenceSetId() string {
	if m != nil {
		return m.ReferenceSetId
	}
	return ""
}

func (m *VariantSet) GetReferenceBounds() []*ReferenceBound {
	if m != nil {
		return m.ReferenceBounds
	}
	return nil
}

func (m *VariantSet) GetMetadata() []*VariantSetMetadata {
	if m != nil {
		return m.Metadata
	}
	return nil
}

func (m *VariantSet) GetName() string {
	if m != nil {
		return m.Name
	}
	return ""
}

func (m *VariantSet) GetDescription() string {
	if m != nil {
		return m.Description
	}
	return ""
}

// A variant represents a change in DNA sequence relative to a reference
// sequence. For example, a variant could represent a SNP or an insertion.
// Variants belong to a variant set.
//
// For more genomics resource definitions, see [Fundamentals of Google
// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
//
// Each of the calls on a variant represent a determination of genotype with
// respect to that variant. For example, a call might assign probability of 0.32
// to the occurrence of a SNP named rs1234 in a sample named NA12345. A call
// belongs to a call set, which contains related calls typically from one
// sample.
type Variant struct {
	// The ID of the variant set this variant belongs to.
	VariantSetId string `protobuf:"bytes,15,opt,name=variant_set_id,json=variantSetId,proto3" json:"variant_set_id,omitempty"`
	// The server-generated variant ID, unique across all variants.
	Id string `protobuf:"bytes,2,opt,name=id,proto3" json:"id,omitempty"`
	// Names for the variant, for example a RefSNP ID.
	Names []string `protobuf:"bytes,3,rep,name=names,proto3" json:"names,omitempty"`
	// The date this variant was created, in milliseconds from the epoch.
	Created int64 `protobuf:"varint,12,opt,name=created,proto3" json:"created,omitempty"`
	// The reference on which this variant occurs.
	// (such as `chr20` or `X`)
	ReferenceName string `protobuf:"bytes,14,opt,name=reference_name,json=referenceName,proto3" json:"reference_name,omitempty"`
	// The position at which this variant occurs (0-based).
	// This corresponds to the first base of the string of reference bases.
	Start int64 `protobuf:"varint,16,opt,name=start,proto3" json:"start,omitempty"`
	// The end position (0-based) of this variant. This corresponds to the first
	// base after the last base in the reference allele. So, the length of
	// the reference allele is (end - start). This is useful for variants
	// that don't explicitly give alternate bases, for example large deletions.
	End int64 `protobuf:"varint,13,opt,name=end,proto3" json:"end,omitempty"`
	// The reference bases for this variant. They start at the given
	// position.
	ReferenceBases string `protobuf:"bytes,6,opt,name=reference_bases,json=referenceBases,proto3" json:"reference_bases,omitempty"`
	// The bases that appear instead of the reference bases.
	AlternateBases []string `protobuf:"bytes,7,rep,name=alternate_bases,json=alternateBases,proto3" json:"alternate_bases,omitempty"`
	// A measure of how likely this variant is to be real.
	// A higher value is better.
	Quality float64 `protobuf:"fixed64,8,opt,name=quality,proto3" json:"quality,omitempty"`
	// A list of filters (normally quality filters) this variant has failed.
	// `PASS` indicates this variant has passed all filters.
	Filter []string `protobuf:"bytes,9,rep,name=filter,proto3" json:"filter,omitempty"`
	// A map of additional variant information. This must be of the form
	// map<string, string[]> (string key mapping to a list of string values).
	Info map[string]*_struct.ListValue `protobuf:"bytes,10,rep,name=info,proto3" json:"info,omitempty" protobuf_key:"bytes,1,opt,name=key,proto3" protobuf_val:"bytes,2,opt,name=value,proto3"`
	// The variant calls for this particular variant. Each one represents the
	// determination of genotype with respect to this variant.
	Calls                []*VariantCall `protobuf:"bytes,11,rep,name=calls,proto3" json:"calls,omitempty"`
	XXX_NoUnkeyedLiteral struct{}       `json:"-"`
	XXX_unrecognized     []byte         `json:"-"`
	XXX_sizecache        int32          `json:"-"`
}

func (m *Variant) Reset()         { *m = Variant{} }
func (m *Variant) String() string { return proto.CompactTextString(m) }
func (*Variant) ProtoMessage()    {}
func (*Variant) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{2}
}
func (m *Variant) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_Variant.Unmarshal(m, b)
}
func (m *Variant) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_Variant.Marshal(b, m, deterministic)
}
func (dst *Variant) XXX_Merge(src proto.Message) {
	xxx_messageInfo_Variant.Merge(dst, src)
}
func (m *Variant) XXX_Size() int {
	return xxx_messageInfo_Variant.Size(m)
}
func (m *Variant) XXX_DiscardUnknown() {
	xxx_messageInfo_Variant.DiscardUnknown(m)
}

var xxx_messageInfo_Variant proto.InternalMessageInfo

func (m *Variant) GetVariantSetId() string {
	if m != nil {
		return m.VariantSetId
	}
	return ""
}

func (m *Variant) GetId() string {
	if m != nil {
		return m.Id
	}
	return ""
}

func (m *Variant) GetNames() []string {
	if m != nil {
		return m.Names
	}
	return nil
}

func (m *Variant) GetCreated() int64 {
	if m != nil {
		return m.Created
	}
	return 0
}

func (m *Variant) GetReferenceName() string {
	if m != nil {
		return m.ReferenceName
	}
	return ""
}

func (m *Variant) GetStart() int64 {
	if m != nil {
		return m.Start
	}
	return 0
}

func (m *Variant) GetEnd() int64 {
	if m != nil {
		return m.End
	}
	return 0
}

func (m *Variant) GetReferenceBases() string {
	if m != nil {
		return m.ReferenceBases
	}
	return ""
}

func (m *Variant) GetAlternateBases() []string {
	if m != nil {
		return m.AlternateBases
	}
	return nil
}

func (m *Variant) GetQuality() float64 {
	if m != nil {
		return m.Quality
	}
	return 0
}

func (m *Variant) GetFilter() []string {
	if m != nil {
		return m.Filter
	}
	return nil
}

func (m *Variant) GetInfo() map[string]*_struct.ListValue {
	if m != nil {
		return m.Info
	}
	return nil
}

func (m *Variant) GetCalls() []*VariantCall {
	if m != nil {
		return m.Calls
	}
	return nil
}

// A call represents the determination of genotype with respect to a particular
// variant. It may include associated information such as quality and phasing.
// For example, a call might assign a probability of 0.32 to the occurrence of
// a SNP named rs1234 in a call set with the name NA12345.
type VariantCall struct {
	// The ID of the call set this variant call belongs to.
	CallSetId string `protobuf:"bytes,8,opt,name=call_set_id,json=callSetId,proto3" json:"call_set_id,omitempty"`
	// The name of the call set this variant call belongs to.
	CallSetName string `protobuf:"bytes,9,opt,name=call_set_name,json=callSetName,proto3" json:"call_set_name,omitempty"`
	// The genotype of this variant call. Each value represents either the value
	// of the `referenceBases` field or a 1-based index into
	// `alternateBases`. If a variant had a `referenceBases`
	// value of `T` and an `alternateBases`
	// value of `["A", "C"]`, and the `genotype` was
	// `[2, 1]`, that would mean the call
	// represented the heterozygous value `CA` for this variant.
	// If the `genotype` was instead `[0, 1]`, the
	// represented value would be `TA`. Ordering of the
	// genotype values is important if the `phaseset` is present.
	// If a genotype is not called (that is, a `.` is present in the
	// GT string) -1 is returned.
	Genotype []int32 `protobuf:"varint,7,rep,packed,name=genotype,proto3" json:"genotype,omitempty"`
	// If this field is present, this variant call's genotype ordering implies
	// the phase of the bases and is consistent with any other variant calls in
	// the same reference sequence which have the same phaseset value.
	// When importing data from VCF, if the genotype data was phased but no
	// phase set was specified this field will be set to `*`.
	Phaseset string `protobuf:"bytes,5,opt,name=phaseset,proto3" json:"phaseset,omitempty"`
	// The genotype likelihoods for this variant call. Each array entry
	// represents how likely a specific genotype is for this call. The value
	// ordering is defined by the GL tag in the VCF spec.
	// If Phred-scaled genotype likelihood scores (PL) are available and
	// log10(P) genotype likelihood scores (GL) are not, PL scores are converted
	// to GL scores.  If both are available, PL scores are stored in `info`.
	GenotypeLikelihood []float64 `protobuf:"fixed64,6,rep,packed,name=genotype_likelihood,json=genotypeLikelihood,proto3" json:"genotype_likelihood,omitempty"`
	// A map of additional variant call information. This must be of the form
	// map<string, string[]> (string key mapping to a list of string values).
	Info                 map[string]*_struct.ListValue `protobuf:"bytes,2,rep,name=info,proto3" json:"info,omitempty" protobuf_key:"bytes,1,opt,name=key,proto3" protobuf_val:"bytes,2,opt,name=value,proto3"`
	XXX_NoUnkeyedLiteral struct{}                      `json:"-"`
	XXX_unrecognized     []byte                        `json:"-"`
	XXX_sizecache        int32                         `json:"-"`
}

func (m *VariantCall) Reset()         { *m = VariantCall{} }
func (m *VariantCall) String() string { return proto.CompactTextString(m) }
func (*VariantCall) ProtoMessage()    {}
func (*VariantCall) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{3}
}
func (m *VariantCall) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_VariantCall.Unmarshal(m, b)
}
func (m *VariantCall) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_VariantCall.Marshal(b, m, deterministic)
}
func (dst *VariantCall) XXX_Merge(src proto.Message) {
	xxx_messageInfo_VariantCall.Merge(dst, src)
}
func (m *VariantCall) XXX_Size() int {
	return xxx_messageInfo_VariantCall.Size(m)
}
func (m *VariantCall) XXX_DiscardUnknown() {
	xxx_messageInfo_VariantCall.DiscardUnknown(m)
}

var xxx_messageInfo_VariantCall proto.InternalMessageInfo

func (m *VariantCall) GetCallSetId() string {
	if m != nil {
		return m.CallSetId
	}
	return ""
}

func (m *VariantCall) GetCallSetName() string {
	if m != nil {
		return m.CallSetName
	}
	return ""
}

func (m *VariantCall) GetGenotype() []int32 {
	if m != nil {
		return m.Genotype
	}
	return nil
}

func (m *VariantCall) GetPhaseset() string {
	if m != nil {
		return m.Phaseset
	}
	return ""
}

func (m *VariantCall) GetGenotypeLikelihood() []float64 {
	if m != nil {
		return m.GenotypeLikelihood
	}
	return nil
}

func (m *VariantCall) GetInfo() map[string]*_struct.ListValue {
	if m != nil {
		return m.Info
	}
	return nil
}

// A call set is a collection of variant calls, typically for one sample. It
// belongs to a variant set.
//
// For more genomics resource definitions, see [Fundamentals of Google
// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
type CallSet struct {
	// The server-generated call set ID, unique across all call sets.
	Id string `protobuf:"bytes,1,opt,name=id,proto3" json:"id,omitempty"`
	// The call set name.
	Name string `protobuf:"bytes,2,opt,name=name,proto3" json:"name,omitempty"`
	// The sample ID this call set corresponds to.
	SampleId string `protobuf:"bytes,7,opt,name=sample_id,json=sampleId,proto3" json:"sample_id,omitempty"`
	// The IDs of the variant sets this call set belongs to. This field must
	// have exactly length one, as a call set belongs to a single variant set.
	// This field is repeated for compatibility with the
	// [GA4GH 0.5.1
	// API](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variants.avdl#L76).
	VariantSetIds []string `protobuf:"bytes,6,rep,name=variant_set_ids,json=variantSetIds,proto3" json:"variant_set_ids,omitempty"`
	// The date this call set was created in milliseconds from the epoch.
	Created int64 `protobuf:"varint,5,opt,name=created,proto3" json:"created,omitempty"`
	// A map of additional call set information. This must be of the form
	// map<string, string[]> (string key mapping to a list of string values).
	Info                 map[string]*_struct.ListValue `protobuf:"bytes,4,rep,name=info,proto3" json:"info,omitempty" protobuf_key:"bytes,1,opt,name=key,proto3" protobuf_val:"bytes,2,opt,name=value,proto3"`
	XXX_NoUnkeyedLiteral struct{}                      `json:"-"`
	XXX_unrecognized     []byte                        `json:"-"`
	XXX_sizecache        int32                         `json:"-"`
}

func (m *CallSet) Reset()         { *m = CallSet{} }
func (m *CallSet) String() string { return proto.CompactTextString(m) }
func (*CallSet) ProtoMessage()    {}
func (*CallSet) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{4}
}
func (m *CallSet) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_CallSet.Unmarshal(m, b)
}
func (m *CallSet) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_CallSet.Marshal(b, m, deterministic)
}
func (dst *CallSet) XXX_Merge(src proto.Message) {
	xxx_messageInfo_CallSet.Merge(dst, src)
}
func (m *CallSet) XXX_Size() int {
	return xxx_messageInfo_CallSet.Size(m)
}
func (m *CallSet) XXX_DiscardUnknown() {
	xxx_messageInfo_CallSet.DiscardUnknown(m)
}

var xxx_messageInfo_CallSet proto.InternalMessageInfo

func (m *CallSet) GetId() string {
	if m != nil {
		return m.Id
	}
	return ""
}

func (m *CallSet) GetName() string {
	if m != nil {
		return m.Name
	}
	return ""
}

func (m *CallSet) GetSampleId() string {
	if m != nil {
		return m.SampleId
	}
	return ""
}

func (m *CallSet) GetVariantSetIds() []string {
	if m != nil {
		return m.VariantSetIds
	}
	return nil
}

func (m *CallSet) GetCreated() int64 {
	if m != nil {
		return m.Created
	}
	return 0
}

func (m *CallSet) GetInfo() map[string]*_struct.ListValue {
	if m != nil {
		return m.Info
	}
	return nil
}

// ReferenceBound records an upper bound for the starting coordinate of
// variants in a particular reference.
type ReferenceBound struct {
	// The name of the reference associated with this reference bound.
	ReferenceName string `protobuf:"bytes,1,opt,name=reference_name,json=referenceName,proto3" json:"reference_name,omitempty"`
	// An upper bound (inclusive) on the starting coordinate of any
	// variant in the reference sequence.
	UpperBound           int64    `protobuf:"varint,2,opt,name=upper_bound,json=upperBound,proto3" json:"upper_bound,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *ReferenceBound) Reset()         { *m = ReferenceBound{} }
func (m *ReferenceBound) String() string { return proto.CompactTextString(m) }
func (*ReferenceBound) ProtoMessage()    {}
func (*ReferenceBound) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{5}
}
func (m *ReferenceBound) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_ReferenceBound.Unmarshal(m, b)
}
func (m *ReferenceBound) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_ReferenceBound.Marshal(b, m, deterministic)
}
func (dst *ReferenceBound) XXX_Merge(src proto.Message) {
	xxx_messageInfo_ReferenceBound.Merge(dst, src)
}
func (m *ReferenceBound) XXX_Size() int {
	return xxx_messageInfo_ReferenceBound.Size(m)
}
func (m *ReferenceBound) XXX_DiscardUnknown() {
	xxx_messageInfo_ReferenceBound.DiscardUnknown(m)
}

var xxx_messageInfo_ReferenceBound proto.InternalMessageInfo

func (m *ReferenceBound) GetReferenceName() string {
	if m != nil {
		return m.ReferenceName
	}
	return ""
}

func (m *ReferenceBound) GetUpperBound() int64 {
	if m != nil {
		return m.UpperBound
	}
	return 0
}

// The variant data import request.
type ImportVariantsRequest struct {
	// Required. The variant set to which variant data should be imported.
	VariantSetId string `protobuf:"bytes,1,opt,name=variant_set_id,json=variantSetId,proto3" json:"variant_set_id,omitempty"`
	// A list of URIs referencing variant files in Google Cloud Storage. URIs can
	// include wildcards [as described
	// here](https://cloud.google.com/storage/docs/gsutil/addlhelp/WildcardNames).
	// Note that recursive wildcards ('**') are not supported.
	SourceUris []string `protobuf:"bytes,2,rep,name=source_uris,json=sourceUris,proto3" json:"source_uris,omitempty"`
	// The format of the variant data being imported. If unspecified, defaults to
	// to `VCF`.
	Format ImportVariantsRequest_Format `protobuf:"varint,3,opt,name=format,proto3,enum=google.genomics.v1.ImportVariantsRequest_Format" json:"format,omitempty"`
	// Convert reference names to the canonical representation.
	// hg19 haploytypes (those reference names containing "_hap")
	// are not modified in any way.
	// All other reference names are modified according to the following rules:
	// The reference name is capitalized.
	// The "chr" prefix is dropped for all autosomes and sex chromsomes.
	// For example "chr17" becomes "17" and "chrX" becomes "X".
	// All mitochondrial chromosomes ("chrM", "chrMT", etc) become "MT".
	NormalizeReferenceNames bool `protobuf:"varint,5,opt,name=normalize_reference_names,json=normalizeReferenceNames,proto3" json:"normalize_reference_names,omitempty"`
	// A mapping between info field keys and the InfoMergeOperations to
	// be performed on them. This is plumbed down to the MergeVariantRequests
	// generated by the resulting import job.
	InfoMergeConfig      map[string]InfoMergeOperation `protobuf:"bytes,6,rep,name=info_merge_config,json=infoMergeConfig,proto3" json:"info_merge_config,omitempty" protobuf_key:"bytes,1,opt,name=key,proto3" protobuf_val:"varint,2,opt,name=value,proto3,enum=google.genomics.v1.InfoMergeOperation"`
	XXX_NoUnkeyedLiteral struct{}                      `json:"-"`
	XXX_unrecognized     []byte                        `json:"-"`
	XXX_sizecache        int32                         `json:"-"`
}

func (m *ImportVariantsRequest) Reset()         { *m = ImportVariantsRequest{} }
func (m *ImportVariantsRequest) String() string { return proto.CompactTextString(m) }
func (*ImportVariantsRequest) ProtoMessage()    {}
func (*ImportVariantsRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{6}
}
func (m *ImportVariantsRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_ImportVariantsRequest.Unmarshal(m, b)
}
func (m *ImportVariantsRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_ImportVariantsRequest.Marshal(b, m, deterministic)
}
func (dst *ImportVariantsRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_ImportVariantsRequest.Merge(dst, src)
}
func (m *ImportVariantsRequest) XXX_Size() int {
	return xxx_messageInfo_ImportVariantsRequest.Size(m)
}
func (m *ImportVariantsRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_ImportVariantsRequest.DiscardUnknown(m)
}

var xxx_messageInfo_ImportVariantsRequest proto.InternalMessageInfo

func (m *ImportVariantsRequest) GetVariantSetId() string {
	if m != nil {
		return m.VariantSetId
	}
	return ""
}

func (m *ImportVariantsRequest) GetSourceUris() []string {
	if m != nil {
		return m.SourceUris
	}
	return nil
}

func (m *ImportVariantsRequest) GetFormat() ImportVariantsRequest_Format {
	if m != nil {
		return m.Format
	}
	return ImportVariantsRequest_FORMAT_UNSPECIFIED
}

func (m *ImportVariantsRequest) GetNormalizeReferenceNames() bool {
	if m != nil {
		return m.NormalizeReferenceNames
	}
	return false
}

func (m *ImportVariantsRequest) GetInfoMergeConfig() map[string]InfoMergeOperation {
	if m != nil {
		return m.InfoMergeConfig
	}
	return nil
}

// The variant data import response.
type ImportVariantsResponse struct {
	// IDs of the call sets created during the import.
	CallSetIds           []string `protobuf:"bytes,1,rep,name=call_set_ids,json=callSetIds,proto3" json:"call_set_ids,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *ImportVariantsResponse) Reset()         { *m = ImportVariantsResponse{} }
func (m *ImportVariantsResponse) String() string { return proto.CompactTextString(m) }
func (*ImportVariantsResponse) ProtoMessage()    {}
func (*ImportVariantsResponse) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{7}
}
func (m *ImportVariantsResponse) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_ImportVariantsResponse.Unmarshal(m, b)
}
func (m *ImportVariantsResponse) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_ImportVariantsResponse.Marshal(b, m, deterministic)
}
func (dst *ImportVariantsResponse) XXX_Merge(src proto.Message) {
	xxx_messageInfo_ImportVariantsResponse.Merge(dst, src)
}
func (m *ImportVariantsResponse) XXX_Size() int {
	return xxx_messageInfo_ImportVariantsResponse.Size(m)
}
func (m *ImportVariantsResponse) XXX_DiscardUnknown() {
	xxx_messageInfo_ImportVariantsResponse.DiscardUnknown(m)
}

var xxx_messageInfo_ImportVariantsResponse proto.InternalMessageInfo

func (m *ImportVariantsResponse) GetCallSetIds() []string {
	if m != nil {
		return m.CallSetIds
	}
	return nil
}

// The CreateVariantSet request
type CreateVariantSetRequest struct {
	// Required. The variant set to be created. Must have a valid `datasetId`.
	VariantSet           *VariantSet `protobuf:"bytes,1,opt,name=variant_set,json=variantSet,proto3" json:"variant_set,omitempty"`
	XXX_NoUnkeyedLiteral struct{}    `json:"-"`
	XXX_unrecognized     []byte      `json:"-"`
	XXX_sizecache        int32       `json:"-"`
}

func (m *CreateVariantSetRequest) Reset()         { *m = CreateVariantSetRequest{} }
func (m *CreateVariantSetRequest) String() string { return proto.CompactTextString(m) }
func (*CreateVariantSetRequest) ProtoMessage()    {}
func (*CreateVariantSetRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{8}
}
func (m *CreateVariantSetRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_CreateVariantSetRequest.Unmarshal(m, b)
}
func (m *CreateVariantSetRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_CreateVariantSetRequest.Marshal(b, m, deterministic)
}
func (dst *CreateVariantSetRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_CreateVariantSetRequest.Merge(dst, src)
}
func (m *CreateVariantSetRequest) XXX_Size() int {
	return xxx_messageInfo_CreateVariantSetRequest.Size(m)
}
func (m *CreateVariantSetRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_CreateVariantSetRequest.DiscardUnknown(m)
}

var xxx_messageInfo_CreateVariantSetRequest proto.InternalMessageInfo

func (m *CreateVariantSetRequest) GetVariantSet() *VariantSet {
	if m != nil {
		return m.VariantSet
	}
	return nil
}

// The variant data export request.
type ExportVariantSetRequest struct {
	// Required. The ID of the variant set that contains variant data which
	// should be exported. The caller must have READ access to this variant set.
	VariantSetId string `protobuf:"bytes,1,opt,name=variant_set_id,json=variantSetId,proto3" json:"variant_set_id,omitempty"`
	// If provided, only variant call information from the specified call sets
	// will be exported. By default all variant calls are exported.
	CallSetIds []string `protobuf:"bytes,2,rep,name=call_set_ids,json=callSetIds,proto3" json:"call_set_ids,omitempty"`
	// Required. The Google Cloud project ID that owns the destination
	// BigQuery dataset. The caller must have WRITE access to this project.  This
	// project will also own the resulting export job.
	ProjectId string `protobuf:"bytes,3,opt,name=project_id,json=projectId,proto3" json:"project_id,omitempty"`
	// The format for the exported data.
	Format ExportVariantSetRequest_Format `protobuf:"varint,4,opt,name=format,proto3,enum=google.genomics.v1.ExportVariantSetRequest_Format" json:"format,omitempty"`
	// Required. The BigQuery dataset to export data to. This dataset must already
	// exist. Note that this is distinct from the Genomics concept of "dataset".
	BigqueryDataset string `protobuf:"bytes,5,opt,name=bigquery_dataset,json=bigqueryDataset,proto3" json:"bigquery_dataset,omitempty"`
	// Required. The BigQuery table to export data to.
	// If the table doesn't exist, it will be created. If it already exists, it
	// will be overwritten.
	BigqueryTable        string   `protobuf:"bytes,6,opt,name=bigquery_table,json=bigqueryTable,proto3" json:"bigquery_table,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *ExportVariantSetRequest) Reset()         { *m = ExportVariantSetRequest{} }
func (m *ExportVariantSetRequest) String() string { return proto.CompactTextString(m) }
func (*ExportVariantSetRequest) ProtoMessage()    {}
func (*ExportVariantSetRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{9}
}
func (m *ExportVariantSetRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_ExportVariantSetRequest.Unmarshal(m, b)
}
func (m *ExportVariantSetRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_ExportVariantSetRequest.Marshal(b, m, deterministic)
}
func (dst *ExportVariantSetRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_ExportVariantSetRequest.Merge(dst, src)
}
func (m *ExportVariantSetRequest) XXX_Size() int {
	return xxx_messageInfo_ExportVariantSetRequest.Size(m)
}
func (m *ExportVariantSetRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_ExportVariantSetRequest.DiscardUnknown(m)
}

var xxx_messageInfo_ExportVariantSetRequest proto.InternalMessageInfo

func (m *ExportVariantSetRequest) GetVariantSetId() string {
	if m != nil {
		return m.VariantSetId
	}
	return ""
}

func (m *ExportVariantSetRequest) GetCallSetIds() []string {
	if m != nil {
		return m.CallSetIds
	}
	return nil
}

func (m *ExportVariantSetRequest) GetProjectId() string {
	if m != nil {
		return m.ProjectId
	}
	return ""
}

func (m *ExportVariantSetRequest) GetFormat() ExportVariantSetRequest_Format {
	if m != nil {
		return m.Format
	}
	return ExportVariantSetRequest_FORMAT_UNSPECIFIED
}

func (m *ExportVariantSetRequest) GetBigqueryDataset() string {
	if m != nil {
		return m.BigqueryDataset
	}
	return ""
}

func (m *ExportVariantSetRequest) GetBigqueryTable() string {
	if m != nil {
		return m.BigqueryTable
	}
	return ""
}

// The variant set request.
type GetVariantSetRequest struct {
	// Required. The ID of the variant set.
	VariantSetId         string   `protobuf:"bytes,1,opt,name=variant_set_id,json=variantSetId,proto3" json:"variant_set_id,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *GetVariantSetRequest) Reset()         { *m = GetVariantSetRequest{} }
func (m *GetVariantSetRequest) String() string { return proto.CompactTextString(m) }
func (*GetVariantSetRequest) ProtoMessage()    {}
func (*GetVariantSetRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{10}
}
func (m *GetVariantSetRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_GetVariantSetRequest.Unmarshal(m, b)
}
func (m *GetVariantSetRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_GetVariantSetRequest.Marshal(b, m, deterministic)
}
func (dst *GetVariantSetRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_GetVariantSetRequest.Merge(dst, src)
}
func (m *GetVariantSetRequest) XXX_Size() int {
	return xxx_messageInfo_GetVariantSetRequest.Size(m)
}
func (m *GetVariantSetRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_GetVariantSetRequest.DiscardUnknown(m)
}

var xxx_messageInfo_GetVariantSetRequest proto.InternalMessageInfo

func (m *GetVariantSetRequest) GetVariantSetId() string {
	if m != nil {
		return m.VariantSetId
	}
	return ""
}

// The search variant sets request.
type SearchVariantSetsRequest struct {
	// Exactly one dataset ID must be provided here. Only variant sets which
	// belong to this dataset will be returned.
	DatasetIds []string `protobuf:"bytes,1,rep,name=dataset_ids,json=datasetIds,proto3" json:"dataset_ids,omitempty"`
	// The continuation token, which is used to page through large result sets.
	// To get the next page of results, set this parameter to the value of
	// `nextPageToken` from the previous response.
	PageToken string `protobuf:"bytes,2,opt,name=page_token,json=pageToken,proto3" json:"page_token,omitempty"`
	// The maximum number of results to return in a single page. If unspecified,
	// defaults to 1024.
	PageSize             int32    `protobuf:"varint,3,opt,name=page_size,json=pageSize,proto3" json:"page_size,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *SearchVariantSetsRequest) Reset()         { *m = SearchVariantSetsRequest{} }
func (m *SearchVariantSetsRequest) String() string { return proto.CompactTextString(m) }
func (*SearchVariantSetsRequest) ProtoMessage()    {}
func (*SearchVariantSetsRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{11}
}
func (m *SearchVariantSetsRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_SearchVariantSetsRequest.Unmarshal(m, b)
}
func (m *SearchVariantSetsRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_SearchVariantSetsRequest.Marshal(b, m, deterministic)
}
func (dst *SearchVariantSetsRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_SearchVariantSetsRequest.Merge(dst, src)
}
func (m *SearchVariantSetsRequest) XXX_Size() int {
	return xxx_messageInfo_SearchVariantSetsRequest.Size(m)
}
func (m *SearchVariantSetsRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_SearchVariantSetsRequest.DiscardUnknown(m)
}

var xxx_messageInfo_SearchVariantSetsRequest proto.InternalMessageInfo

func (m *SearchVariantSetsRequest) GetDatasetIds() []string {
	if m != nil {
		return m.DatasetIds
	}
	return nil
}

func (m *SearchVariantSetsRequest) GetPageToken() string {
	if m != nil {
		return m.PageToken
	}
	return ""
}

func (m *SearchVariantSetsRequest) GetPageSize() int32 {
	if m != nil {
		return m.PageSize
	}
	return 0
}

// The search variant sets response.
type SearchVariantSetsResponse struct {
	// The variant sets belonging to the requested dataset.
	VariantSets []*VariantSet `protobuf:"bytes,1,rep,name=variant_sets,json=variantSets,proto3" json:"variant_sets,omitempty"`
	// The continuation token, which is used to page through large result sets.
	// Provide this value in a subsequent request to return the next page of
	// results. This field will be empty if there aren't any additional results.
	NextPageToken        string   `protobuf:"bytes,2,opt,name=next_page_token,json=nextPageToken,proto3" json:"next_page_token,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *SearchVariantSetsResponse) Reset()         { *m = SearchVariantSetsResponse{} }
func (m *SearchVariantSetsResponse) String() string { return proto.CompactTextString(m) }
func (*SearchVariantSetsResponse) ProtoMessage()    {}
func (*SearchVariantSetsResponse) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{12}
}
func (m *SearchVariantSetsResponse) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_SearchVariantSetsResponse.Unmarshal(m, b)
}
func (m *SearchVariantSetsResponse) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_SearchVariantSetsResponse.Marshal(b, m, deterministic)
}
func (dst *SearchVariantSetsResponse) XXX_Merge(src proto.Message) {
	xxx_messageInfo_SearchVariantSetsResponse.Merge(dst, src)
}
func (m *SearchVariantSetsResponse) XXX_Size() int {
	return xxx_messageInfo_SearchVariantSetsResponse.Size(m)
}
func (m *SearchVariantSetsResponse) XXX_DiscardUnknown() {
	xxx_messageInfo_SearchVariantSetsResponse.DiscardUnknown(m)
}

var xxx_messageInfo_SearchVariantSetsResponse proto.InternalMessageInfo

func (m *SearchVariantSetsResponse) GetVariantSets() []*VariantSet {
	if m != nil {
		return m.VariantSets
	}
	return nil
}

func (m *SearchVariantSetsResponse) GetNextPageToken() string {
	if m != nil {
		return m.NextPageToken
	}
	return ""
}

// The delete variant set request.
type DeleteVariantSetRequest struct {
	// The ID of the variant set to be deleted.
	VariantSetId         string   `protobuf:"bytes,1,opt,name=variant_set_id,json=variantSetId,proto3" json:"variant_set_id,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *DeleteVariantSetRequest) Reset()         { *m = DeleteVariantSetRequest{} }
func (m *DeleteVariantSetRequest) String() string { return proto.CompactTextString(m) }
func (*DeleteVariantSetRequest) ProtoMessage()    {}
func (*DeleteVariantSetRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{13}
}
func (m *DeleteVariantSetRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_DeleteVariantSetRequest.Unmarshal(m, b)
}
func (m *DeleteVariantSetRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_DeleteVariantSetRequest.Marshal(b, m, deterministic)
}
func (dst *DeleteVariantSetRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_DeleteVariantSetRequest.Merge(dst, src)
}
func (m *DeleteVariantSetRequest) XXX_Size() int {
	return xxx_messageInfo_DeleteVariantSetRequest.Size(m)
}
func (m *DeleteVariantSetRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_DeleteVariantSetRequest.DiscardUnknown(m)
}

var xxx_messageInfo_DeleteVariantSetRequest proto.InternalMessageInfo

func (m *DeleteVariantSetRequest) GetVariantSetId() string {
	if m != nil {
		return m.VariantSetId
	}
	return ""
}

type UpdateVariantSetRequest struct {
	// The ID of the variant to be updated (must already exist).
	VariantSetId string `protobuf:"bytes,1,opt,name=variant_set_id,json=variantSetId,proto3" json:"variant_set_id,omitempty"`
	// The new variant data. Only the variant_set.metadata will be considered
	// for update.
	VariantSet *VariantSet `protobuf:"bytes,2,opt,name=variant_set,json=variantSet,proto3" json:"variant_set,omitempty"`
	// An optional mask specifying which fields to update. Supported fields:
	//
	// * [metadata][google.genomics.v1.VariantSet.metadata].
	// * [name][google.genomics.v1.VariantSet.name].
	// * [description][google.genomics.v1.VariantSet.description].
	//
	// Leaving `updateMask` unset is equivalent to specifying all mutable
	// fields.
	UpdateMask           *field_mask.FieldMask `protobuf:"bytes,5,opt,name=update_mask,json=updateMask,proto3" json:"update_mask,omitempty"`
	XXX_NoUnkeyedLiteral struct{}              `json:"-"`
	XXX_unrecognized     []byte                `json:"-"`
	XXX_sizecache        int32                 `json:"-"`
}

func (m *UpdateVariantSetRequest) Reset()         { *m = UpdateVariantSetRequest{} }
func (m *UpdateVariantSetRequest) String() string { return proto.CompactTextString(m) }
func (*UpdateVariantSetRequest) ProtoMessage()    {}
func (*UpdateVariantSetRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{14}
}
func (m *UpdateVariantSetRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_UpdateVariantSetRequest.Unmarshal(m, b)
}
func (m *UpdateVariantSetRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_UpdateVariantSetRequest.Marshal(b, m, deterministic)
}
func (dst *UpdateVariantSetRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_UpdateVariantSetRequest.Merge(dst, src)
}
func (m *UpdateVariantSetRequest) XXX_Size() int {
	return xxx_messageInfo_UpdateVariantSetRequest.Size(m)
}
func (m *UpdateVariantSetRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_UpdateVariantSetRequest.DiscardUnknown(m)
}

var xxx_messageInfo_UpdateVariantSetRequest proto.InternalMessageInfo

func (m *UpdateVariantSetRequest) GetVariantSetId() string {
	if m != nil {
		return m.VariantSetId
	}
	return ""
}

func (m *UpdateVariantSetRequest) GetVariantSet() *VariantSet {
	if m != nil {
		return m.VariantSet
	}
	return nil
}

func (m *UpdateVariantSetRequest) GetUpdateMask() *field_mask.FieldMask {
	if m != nil {
		return m.UpdateMask
	}
	return nil
}

// The variant search request.
type SearchVariantsRequest struct {
	// At most one variant set ID must be provided. Only variants from this
	// variant set will be returned. If omitted, a call set id must be included in
	// the request.
	VariantSetIds []string `protobuf:"bytes,1,rep,name=variant_set_ids,json=variantSetIds,proto3" json:"variant_set_ids,omitempty"`
	// Only return variants which have exactly this name.
	VariantName string `protobuf:"bytes,2,opt,name=variant_name,json=variantName,proto3" json:"variant_name,omitempty"`
	// Only return variant calls which belong to call sets with these ids.
	// Leaving this blank returns all variant calls. If a variant has no
	// calls belonging to any of these call sets, it won't be returned at all.
	CallSetIds []string `protobuf:"bytes,3,rep,name=call_set_ids,json=callSetIds,proto3" json:"call_set_ids,omitempty"`
	// Required. Only return variants in this reference sequence.
	ReferenceName string `protobuf:"bytes,4,opt,name=reference_name,json=referenceName,proto3" json:"reference_name,omitempty"`
	// The beginning of the window (0-based, inclusive) for which
	// overlapping variants should be returned. If unspecified, defaults to 0.
	Start int64 `protobuf:"varint,5,opt,name=start,proto3" json:"start,omitempty"`
	// The end of the window, 0-based exclusive. If unspecified or 0, defaults to
	// the length of the reference.
	End int64 `protobuf:"varint,6,opt,name=end,proto3" json:"end,omitempty"`
	// The continuation token, which is used to page through large result sets.
	// To get the next page of results, set this parameter to the value of
	// `nextPageToken` from the previous response.
	PageToken string `protobuf:"bytes,7,opt,name=page_token,json=pageToken,proto3" json:"page_token,omitempty"`
	// The maximum number of variants to return in a single page. If unspecified,
	// defaults to 5000. The maximum value is 10000.
	PageSize int32 `protobuf:"varint,8,opt,name=page_size,json=pageSize,proto3" json:"page_size,omitempty"`
	// The maximum number of calls to return in a single page. Note that this
	// limit may be exceeded in the event that a matching variant contains more
	// calls than the requested maximum. If unspecified, defaults to 5000. The
	// maximum value is 10000.
	MaxCalls             int32    `protobuf:"varint,9,opt,name=max_calls,json=maxCalls,proto3" json:"max_calls,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *SearchVariantsRequest) Reset()         { *m = SearchVariantsRequest{} }
func (m *SearchVariantsRequest) String() string { return proto.CompactTextString(m) }
func (*SearchVariantsRequest) ProtoMessage()    {}
func (*SearchVariantsRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{15}
}
func (m *SearchVariantsRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_SearchVariantsRequest.Unmarshal(m, b)
}
func (m *SearchVariantsRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_SearchVariantsRequest.Marshal(b, m, deterministic)
}
func (dst *SearchVariantsRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_SearchVariantsRequest.Merge(dst, src)
}
func (m *SearchVariantsRequest) XXX_Size() int {
	return xxx_messageInfo_SearchVariantsRequest.Size(m)
}
func (m *SearchVariantsRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_SearchVariantsRequest.DiscardUnknown(m)
}

var xxx_messageInfo_SearchVariantsRequest proto.InternalMessageInfo

func (m *SearchVariantsRequest) GetVariantSetIds() []string {
	if m != nil {
		return m.VariantSetIds
	}
	return nil
}

func (m *SearchVariantsRequest) GetVariantName() string {
	if m != nil {
		return m.VariantName
	}
	return ""
}

func (m *SearchVariantsRequest) GetCallSetIds() []string {
	if m != nil {
		return m.CallSetIds
	}
	return nil
}

func (m *SearchVariantsRequest) GetReferenceName() string {
	if m != nil {
		return m.ReferenceName
	}
	return ""
}

func (m *SearchVariantsRequest) GetStart() int64 {
	if m != nil {
		return m.Start
	}
	return 0
}

func (m *SearchVariantsRequest) GetEnd() int64 {
	if m != nil {
		return m.End
	}
	return 0
}

func (m *SearchVariantsRequest) GetPageToken() string {
	if m != nil {
		return m.PageToken
	}
	return ""
}

func (m *SearchVariantsRequest) GetPageSize() int32 {
	if m != nil {
		return m.PageSize
	}
	return 0
}

func (m *SearchVariantsRequest) GetMaxCalls() int32 {
	if m != nil {
		return m.MaxCalls
	}
	return 0
}

// The variant search response.
type SearchVariantsResponse struct {
	// The list of matching Variants.
	Variants []*Variant `protobuf:"bytes,1,rep,name=variants,proto3" json:"variants,omitempty"`
	// The continuation token, which is used to page through large result sets.
	// Provide this value in a subsequent request to return the next page of
	// results. This field will be empty if there aren't any additional results.
	NextPageToken        string   `protobuf:"bytes,2,opt,name=next_page_token,json=nextPageToken,proto3" json:"next_page_token,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *SearchVariantsResponse) Reset()         { *m = SearchVariantsResponse{} }
func (m *SearchVariantsResponse) String() string { return proto.CompactTextString(m) }
func (*SearchVariantsResponse) ProtoMessage()    {}
func (*SearchVariantsResponse) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{16}
}
func (m *SearchVariantsResponse) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_SearchVariantsResponse.Unmarshal(m, b)
}
func (m *SearchVariantsResponse) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_SearchVariantsResponse.Marshal(b, m, deterministic)
}
func (dst *SearchVariantsResponse) XXX_Merge(src proto.Message) {
	xxx_messageInfo_SearchVariantsResponse.Merge(dst, src)
}
func (m *SearchVariantsResponse) XXX_Size() int {
	return xxx_messageInfo_SearchVariantsResponse.Size(m)
}
func (m *SearchVariantsResponse) XXX_DiscardUnknown() {
	xxx_messageInfo_SearchVariantsResponse.DiscardUnknown(m)
}

var xxx_messageInfo_SearchVariantsResponse proto.InternalMessageInfo

func (m *SearchVariantsResponse) GetVariants() []*Variant {
	if m != nil {
		return m.Variants
	}
	return nil
}

func (m *SearchVariantsResponse) GetNextPageToken() string {
	if m != nil {
		return m.NextPageToken
	}
	return ""
}

type CreateVariantRequest struct {
	// The variant to be created.
	Variant              *Variant `protobuf:"bytes,1,opt,name=variant,proto3" json:"variant,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *CreateVariantRequest) Reset()         { *m = CreateVariantRequest{} }
func (m *CreateVariantRequest) String() string { return proto.CompactTextString(m) }
func (*CreateVariantRequest) ProtoMessage()    {}
func (*CreateVariantRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{17}
}
func (m *CreateVariantRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_CreateVariantRequest.Unmarshal(m, b)
}
func (m *CreateVariantRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_CreateVariantRequest.Marshal(b, m, deterministic)
}
func (dst *CreateVariantRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_CreateVariantRequest.Merge(dst, src)
}
func (m *CreateVariantRequest) XXX_Size() int {
	return xxx_messageInfo_CreateVariantRequest.Size(m)
}
func (m *CreateVariantRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_CreateVariantRequest.DiscardUnknown(m)
}

var xxx_messageInfo_CreateVariantRequest proto.InternalMessageInfo

func (m *CreateVariantRequest) GetVariant() *Variant {
	if m != nil {
		return m.Variant
	}
	return nil
}

type UpdateVariantRequest struct {
	// The ID of the variant to be updated.
	VariantId string `protobuf:"bytes,1,opt,name=variant_id,json=variantId,proto3" json:"variant_id,omitempty"`
	// The new variant data.
	Variant *Variant `protobuf:"bytes,2,opt,name=variant,proto3" json:"variant,omitempty"`
	// An optional mask specifying which fields to update. At this time, mutable
	// fields are [names][google.genomics.v1.Variant.names] and
	// [info][google.genomics.v1.Variant.info]. Acceptable values are "names" and
	// "info". If unspecified, all mutable fields will be updated.
	UpdateMask           *field_mask.FieldMask `protobuf:"bytes,3,opt,name=update_mask,json=updateMask,proto3" json:"update_mask,omitempty"`
	XXX_NoUnkeyedLiteral struct{}              `json:"-"`
	XXX_unrecognized     []byte                `json:"-"`
	XXX_sizecache        int32                 `json:"-"`
}

func (m *UpdateVariantRequest) Reset()         { *m = UpdateVariantRequest{} }
func (m *UpdateVariantRequest) String() string { return proto.CompactTextString(m) }
func (*UpdateVariantRequest) ProtoMessage()    {}
func (*UpdateVariantRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{18}
}
func (m *UpdateVariantRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_UpdateVariantRequest.Unmarshal(m, b)
}
func (m *UpdateVariantRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_UpdateVariantRequest.Marshal(b, m, deterministic)
}
func (dst *UpdateVariantRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_UpdateVariantRequest.Merge(dst, src)
}
func (m *UpdateVariantRequest) XXX_Size() int {
	return xxx_messageInfo_UpdateVariantRequest.Size(m)
}
func (m *UpdateVariantRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_UpdateVariantRequest.DiscardUnknown(m)
}

var xxx_messageInfo_UpdateVariantRequest proto.InternalMessageInfo

func (m *UpdateVariantRequest) GetVariantId() string {
	if m != nil {
		return m.VariantId
	}
	return ""
}

func (m *UpdateVariantRequest) GetVariant() *Variant {
	if m != nil {
		return m.Variant
	}
	return nil
}

func (m *UpdateVariantRequest) GetUpdateMask() *field_mask.FieldMask {
	if m != nil {
		return m.UpdateMask
	}
	return nil
}

type DeleteVariantRequest struct {
	// The ID of the variant to be deleted.
	VariantId            string   `protobuf:"bytes,1,opt,name=variant_id,json=variantId,proto3" json:"variant_id,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *DeleteVariantRequest) Reset()         { *m = DeleteVariantRequest{} }
func (m *DeleteVariantRequest) String() string { return proto.CompactTextString(m) }
func (*DeleteVariantRequest) ProtoMessage()    {}
func (*DeleteVariantRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{19}
}
func (m *DeleteVariantRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_DeleteVariantRequest.Unmarshal(m, b)
}
func (m *DeleteVariantRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_DeleteVariantRequest.Marshal(b, m, deterministic)
}
func (dst *DeleteVariantRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_DeleteVariantRequest.Merge(dst, src)
}
func (m *DeleteVariantRequest) XXX_Size() int {
	return xxx_messageInfo_DeleteVariantRequest.Size(m)
}
func (m *DeleteVariantRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_DeleteVariantRequest.DiscardUnknown(m)
}

var xxx_messageInfo_DeleteVariantRequest proto.InternalMessageInfo

func (m *DeleteVariantRequest) GetVariantId() string {
	if m != nil {
		return m.VariantId
	}
	return ""
}

type GetVariantRequest struct {
	// The ID of the variant.
	VariantId            string   `protobuf:"bytes,1,opt,name=variant_id,json=variantId,proto3" json:"variant_id,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *GetVariantRequest) Reset()         { *m = GetVariantRequest{} }
func (m *GetVariantRequest) String() string { return proto.CompactTextString(m) }
func (*GetVariantRequest) ProtoMessage()    {}
func (*GetVariantRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{20}
}
func (m *GetVariantRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_GetVariantRequest.Unmarshal(m, b)
}
func (m *GetVariantRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_GetVariantRequest.Marshal(b, m, deterministic)
}
func (dst *GetVariantRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_GetVariantRequest.Merge(dst, src)
}
func (m *GetVariantRequest) XXX_Size() int {
	return xxx_messageInfo_GetVariantRequest.Size(m)
}
func (m *GetVariantRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_GetVariantRequest.DiscardUnknown(m)
}

var xxx_messageInfo_GetVariantRequest proto.InternalMessageInfo

func (m *GetVariantRequest) GetVariantId() string {
	if m != nil {
		return m.VariantId
	}
	return ""
}

type MergeVariantsRequest struct {
	// The destination variant set.
	VariantSetId string `protobuf:"bytes,1,opt,name=variant_set_id,json=variantSetId,proto3" json:"variant_set_id,omitempty"`
	// The variants to be merged with existing variants.
	Variants []*Variant `protobuf:"bytes,2,rep,name=variants,proto3" json:"variants,omitempty"`
	// A mapping between info field keys and the InfoMergeOperations to
	// be performed on them.
	InfoMergeConfig      map[string]InfoMergeOperation `protobuf:"bytes,3,rep,name=info_merge_config,json=infoMergeConfig,proto3" json:"info_merge_config,omitempty" protobuf_key:"bytes,1,opt,name=key,proto3" protobuf_val:"varint,2,opt,name=value,proto3,enum=google.genomics.v1.InfoMergeOperation"`
	XXX_NoUnkeyedLiteral struct{}                      `json:"-"`
	XXX_unrecognized     []byte                        `json:"-"`
	XXX_sizecache        int32                         `json:"-"`
}

func (m *MergeVariantsRequest) Reset()         { *m = MergeVariantsRequest{} }
func (m *MergeVariantsRequest) String() string { return proto.CompactTextString(m) }
func (*MergeVariantsRequest) ProtoMessage()    {}
func (*MergeVariantsRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{21}
}
func (m *MergeVariantsRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_MergeVariantsRequest.Unmarshal(m, b)
}
func (m *MergeVariantsRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_MergeVariantsRequest.Marshal(b, m, deterministic)
}
func (dst *MergeVariantsRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_MergeVariantsRequest.Merge(dst, src)
}
func (m *MergeVariantsRequest) XXX_Size() int {
	return xxx_messageInfo_MergeVariantsRequest.Size(m)
}
func (m *MergeVariantsRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_MergeVariantsRequest.DiscardUnknown(m)
}

var xxx_messageInfo_MergeVariantsRequest proto.InternalMessageInfo

func (m *MergeVariantsRequest) GetVariantSetId() string {
	if m != nil {
		return m.VariantSetId
	}
	return ""
}

func (m *MergeVariantsRequest) GetVariants() []*Variant {
	if m != nil {
		return m.Variants
	}
	return nil
}

func (m *MergeVariantsRequest) GetInfoMergeConfig() map[string]InfoMergeOperation {
	if m != nil {
		return m.InfoMergeConfig
	}
	return nil
}

// The call set search request.
type SearchCallSetsRequest struct {
	// Restrict the query to call sets within the given variant sets. At least one
	// ID must be provided.
	VariantSetIds []string `protobuf:"bytes,1,rep,name=variant_set_ids,json=variantSetIds,proto3" json:"variant_set_ids,omitempty"`
	// Only return call sets for which a substring of the name matches this
	// string.
	Name string `protobuf:"bytes,2,opt,name=name,proto3" json:"name,omitempty"`
	// The continuation token, which is used to page through large result sets.
	// To get the next page of results, set this parameter to the value of
	// `nextPageToken` from the previous response.
	PageToken string `protobuf:"bytes,3,opt,name=page_token,json=pageToken,proto3" json:"page_token,omitempty"`
	// The maximum number of results to return in a single page. If unspecified,
	// defaults to 1024.
	PageSize             int32    `protobuf:"varint,4,opt,name=page_size,json=pageSize,proto3" json:"page_size,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *SearchCallSetsRequest) Reset()         { *m = SearchCallSetsRequest{} }
func (m *SearchCallSetsRequest) String() string { return proto.CompactTextString(m) }
func (*SearchCallSetsRequest) ProtoMessage()    {}
func (*SearchCallSetsRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{22}
}
func (m *SearchCallSetsRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_SearchCallSetsRequest.Unmarshal(m, b)
}
func (m *SearchCallSetsRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_SearchCallSetsRequest.Marshal(b, m, deterministic)
}
func (dst *SearchCallSetsRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_SearchCallSetsRequest.Merge(dst, src)
}
func (m *SearchCallSetsRequest) XXX_Size() int {
	return xxx_messageInfo_SearchCallSetsRequest.Size(m)
}
func (m *SearchCallSetsRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_SearchCallSetsRequest.DiscardUnknown(m)
}

var xxx_messageInfo_SearchCallSetsRequest proto.InternalMessageInfo

func (m *SearchCallSetsRequest) GetVariantSetIds() []string {
	if m != nil {
		return m.VariantSetIds
	}
	return nil
}

func (m *SearchCallSetsRequest) GetName() string {
	if m != nil {
		return m.Name
	}
	return ""
}

func (m *SearchCallSetsRequest) GetPageToken() string {
	if m != nil {
		return m.PageToken
	}
	return ""
}

func (m *SearchCallSetsRequest) GetPageSize() int32 {
	if m != nil {
		return m.PageSize
	}
	return 0
}

// The call set search response.
type SearchCallSetsResponse struct {
	// The list of matching call sets.
	CallSets []*CallSet `protobuf:"bytes,1,rep,name=call_sets,json=callSets,proto3" json:"call_sets,omitempty"`
	// The continuation token, which is used to page through large result sets.
	// Provide this value in a subsequent request to return the next page of
	// results. This field will be empty if there aren't any additional results.
	NextPageToken        string   `protobuf:"bytes,2,opt,name=next_page_token,json=nextPageToken,proto3" json:"next_page_token,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *SearchCallSetsResponse) Reset()         { *m = SearchCallSetsResponse{} }
func (m *SearchCallSetsResponse) String() string { return proto.CompactTextString(m) }
func (*SearchCallSetsResponse) ProtoMessage()    {}
func (*SearchCallSetsResponse) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{23}
}
func (m *SearchCallSetsResponse) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_SearchCallSetsResponse.Unmarshal(m, b)
}
func (m *SearchCallSetsResponse) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_SearchCallSetsResponse.Marshal(b, m, deterministic)
}
func (dst *SearchCallSetsResponse) XXX_Merge(src proto.Message) {
	xxx_messageInfo_SearchCallSetsResponse.Merge(dst, src)
}
func (m *SearchCallSetsResponse) XXX_Size() int {
	return xxx_messageInfo_SearchCallSetsResponse.Size(m)
}
func (m *SearchCallSetsResponse) XXX_DiscardUnknown() {
	xxx_messageInfo_SearchCallSetsResponse.DiscardUnknown(m)
}

var xxx_messageInfo_SearchCallSetsResponse proto.InternalMessageInfo

func (m *SearchCallSetsResponse) GetCallSets() []*CallSet {
	if m != nil {
		return m.CallSets
	}
	return nil
}

func (m *SearchCallSetsResponse) GetNextPageToken() string {
	if m != nil {
		return m.NextPageToken
	}
	return ""
}

type CreateCallSetRequest struct {
	// The call set to be created.
	CallSet              *CallSet `protobuf:"bytes,1,opt,name=call_set,json=callSet,proto3" json:"call_set,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *CreateCallSetRequest) Reset()         { *m = CreateCallSetRequest{} }
func (m *CreateCallSetRequest) String() string { return proto.CompactTextString(m) }
func (*CreateCallSetRequest) ProtoMessage()    {}
func (*CreateCallSetRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{24}
}
func (m *CreateCallSetRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_CreateCallSetRequest.Unmarshal(m, b)
}
func (m *CreateCallSetRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_CreateCallSetRequest.Marshal(b, m, deterministic)
}
func (dst *CreateCallSetRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_CreateCallSetRequest.Merge(dst, src)
}
func (m *CreateCallSetRequest) XXX_Size() int {
	return xxx_messageInfo_CreateCallSetRequest.Size(m)
}
func (m *CreateCallSetRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_CreateCallSetRequest.DiscardUnknown(m)
}

var xxx_messageInfo_CreateCallSetRequest proto.InternalMessageInfo

func (m *CreateCallSetRequest) GetCallSet() *CallSet {
	if m != nil {
		return m.CallSet
	}
	return nil
}

type UpdateCallSetRequest struct {
	// The ID of the call set to be updated.
	CallSetId string `protobuf:"bytes,1,opt,name=call_set_id,json=callSetId,proto3" json:"call_set_id,omitempty"`
	// The new call set data.
	CallSet *CallSet `protobuf:"bytes,2,opt,name=call_set,json=callSet,proto3" json:"call_set,omitempty"`
	// An optional mask specifying which fields to update. At this time, the only
	// mutable field is [name][google.genomics.v1.CallSet.name]. The only
	// acceptable value is "name". If unspecified, all mutable fields will be
	// updated.
	UpdateMask           *field_mask.FieldMask `protobuf:"bytes,3,opt,name=update_mask,json=updateMask,proto3" json:"update_mask,omitempty"`
	XXX_NoUnkeyedLiteral struct{}              `json:"-"`
	XXX_unrecognized     []byte                `json:"-"`
	XXX_sizecache        int32                 `json:"-"`
}

func (m *UpdateCallSetRequest) Reset()         { *m = UpdateCallSetRequest{} }
func (m *UpdateCallSetRequest) String() string { return proto.CompactTextString(m) }
func (*UpdateCallSetRequest) ProtoMessage()    {}
func (*UpdateCallSetRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{25}
}
func (m *UpdateCallSetRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_UpdateCallSetRequest.Unmarshal(m, b)
}
func (m *UpdateCallSetRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_UpdateCallSetRequest.Marshal(b, m, deterministic)
}
func (dst *UpdateCallSetRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_UpdateCallSetRequest.Merge(dst, src)
}
func (m *UpdateCallSetRequest) XXX_Size() int {
	return xxx_messageInfo_UpdateCallSetRequest.Size(m)
}
func (m *UpdateCallSetRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_UpdateCallSetRequest.DiscardUnknown(m)
}

var xxx_messageInfo_UpdateCallSetRequest proto.InternalMessageInfo

func (m *UpdateCallSetRequest) GetCallSetId() string {
	if m != nil {
		return m.CallSetId
	}
	return ""
}

func (m *UpdateCallSetRequest) GetCallSet() *CallSet {
	if m != nil {
		return m.CallSet
	}
	return nil
}

func (m *UpdateCallSetRequest) GetUpdateMask() *field_mask.FieldMask {
	if m != nil {
		return m.UpdateMask
	}
	return nil
}

type DeleteCallSetRequest struct {
	// The ID of the call set to be deleted.
	CallSetId            string   `protobuf:"bytes,1,opt,name=call_set_id,json=callSetId,proto3" json:"call_set_id,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *DeleteCallSetRequest) Reset()         { *m = DeleteCallSetRequest{} }
func (m *DeleteCallSetRequest) String() string { return proto.CompactTextString(m) }
func (*DeleteCallSetRequest) ProtoMessage()    {}
func (*DeleteCallSetRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{26}
}
func (m *DeleteCallSetRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_DeleteCallSetRequest.Unmarshal(m, b)
}
func (m *DeleteCallSetRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_DeleteCallSetRequest.Marshal(b, m, deterministic)
}
func (dst *DeleteCallSetRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_DeleteCallSetRequest.Merge(dst, src)
}
func (m *DeleteCallSetRequest) XXX_Size() int {
	return xxx_messageInfo_DeleteCallSetRequest.Size(m)
}
func (m *DeleteCallSetRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_DeleteCallSetRequest.DiscardUnknown(m)
}

var xxx_messageInfo_DeleteCallSetRequest proto.InternalMessageInfo

func (m *DeleteCallSetRequest) GetCallSetId() string {
	if m != nil {
		return m.CallSetId
	}
	return ""
}

type GetCallSetRequest struct {
	// The ID of the call set.
	CallSetId            string   `protobuf:"bytes,1,opt,name=call_set_id,json=callSetId,proto3" json:"call_set_id,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *GetCallSetRequest) Reset()         { *m = GetCallSetRequest{} }
func (m *GetCallSetRequest) String() string { return proto.CompactTextString(m) }
func (*GetCallSetRequest) ProtoMessage()    {}
func (*GetCallSetRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{27}
}
func (m *GetCallSetRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_GetCallSetRequest.Unmarshal(m, b)
}
func (m *GetCallSetRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_GetCallSetRequest.Marshal(b, m, deterministic)
}
func (dst *GetCallSetRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_GetCallSetRequest.Merge(dst, src)
}
func (m *GetCallSetRequest) XXX_Size() int {
	return xxx_messageInfo_GetCallSetRequest.Size(m)
}
func (m *GetCallSetRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_GetCallSetRequest.DiscardUnknown(m)
}

var xxx_messageInfo_GetCallSetRequest proto.InternalMessageInfo

func (m *GetCallSetRequest) GetCallSetId() string {
	if m != nil {
		return m.CallSetId
	}
	return ""
}

// The stream variants request.
type StreamVariantsRequest struct {
	// The Google Cloud project ID which will be billed
	// for this access. The caller must have WRITE access to this project.
	// Required.
	ProjectId string `protobuf:"bytes,1,opt,name=project_id,json=projectId,proto3" json:"project_id,omitempty"`
	// The variant set ID from which to stream variants.
	VariantSetId string `protobuf:"bytes,2,opt,name=variant_set_id,json=variantSetId,proto3" json:"variant_set_id,omitempty"`
	// Only return variant calls which belong to call sets with these IDs.
	// Leaving this blank returns all variant calls.
	CallSetIds []string `protobuf:"bytes,3,rep,name=call_set_ids,json=callSetIds,proto3" json:"call_set_ids,omitempty"`
	// Required. Only return variants in this reference sequence.
	ReferenceName string `protobuf:"bytes,4,opt,name=reference_name,json=referenceName,proto3" json:"reference_name,omitempty"`
	// The beginning of the window (0-based, inclusive) for which
	// overlapping variants should be returned.
	Start int64 `protobuf:"varint,5,opt,name=start,proto3" json:"start,omitempty"`
	// The end of the window (0-based, exclusive) for which overlapping
	// variants should be returned.
	End                  int64    `protobuf:"varint,6,opt,name=end,proto3" json:"end,omitempty"`
	XXX_NoUnkeyedLiteral struct{} `json:"-"`
	XXX_unrecognized     []byte   `json:"-"`
	XXX_sizecache        int32    `json:"-"`
}

func (m *StreamVariantsRequest) Reset()         { *m = StreamVariantsRequest{} }
func (m *StreamVariantsRequest) String() string { return proto.CompactTextString(m) }
func (*StreamVariantsRequest) ProtoMessage()    {}
func (*StreamVariantsRequest) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{28}
}
func (m *StreamVariantsRequest) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_StreamVariantsRequest.Unmarshal(m, b)
}
func (m *StreamVariantsRequest) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_StreamVariantsRequest.Marshal(b, m, deterministic)
}
func (dst *StreamVariantsRequest) XXX_Merge(src proto.Message) {
	xxx_messageInfo_StreamVariantsRequest.Merge(dst, src)
}
func (m *StreamVariantsRequest) XXX_Size() int {
	return xxx_messageInfo_StreamVariantsRequest.Size(m)
}
func (m *StreamVariantsRequest) XXX_DiscardUnknown() {
	xxx_messageInfo_StreamVariantsRequest.DiscardUnknown(m)
}

var xxx_messageInfo_StreamVariantsRequest proto.InternalMessageInfo

func (m *StreamVariantsRequest) GetProjectId() string {
	if m != nil {
		return m.ProjectId
	}
	return ""
}

func (m *StreamVariantsRequest) GetVariantSetId() string {
	if m != nil {
		return m.VariantSetId
	}
	return ""
}

func (m *StreamVariantsRequest) GetCallSetIds() []string {
	if m != nil {
		return m.CallSetIds
	}
	return nil
}

func (m *StreamVariantsRequest) GetReferenceName() string {
	if m != nil {
		return m.ReferenceName
	}
	return ""
}

func (m *StreamVariantsRequest) GetStart() int64 {
	if m != nil {
		return m.Start
	}
	return 0
}

func (m *StreamVariantsRequest) GetEnd() int64 {
	if m != nil {
		return m.End
	}
	return 0
}

type StreamVariantsResponse struct {
	Variants             []*Variant `protobuf:"bytes,1,rep,name=variants,proto3" json:"variants,omitempty"`
	XXX_NoUnkeyedLiteral struct{}   `json:"-"`
	XXX_unrecognized     []byte     `json:"-"`
	XXX_sizecache        int32      `json:"-"`
}

func (m *StreamVariantsResponse) Reset()         { *m = StreamVariantsResponse{} }
func (m *StreamVariantsResponse) String() string { return proto.CompactTextString(m) }
func (*StreamVariantsResponse) ProtoMessage()    {}
func (*StreamVariantsResponse) Descriptor() ([]byte, []int) {
	return fileDescriptor_variants_9857dc8060ef8f89, []int{29}
}
func (m *StreamVariantsResponse) XXX_Unmarshal(b []byte) error {
	return xxx_messageInfo_StreamVariantsResponse.Unmarshal(m, b)
}
func (m *StreamVariantsResponse) XXX_Marshal(b []byte, deterministic bool) ([]byte, error) {
	return xxx_messageInfo_StreamVariantsResponse.Marshal(b, m, deterministic)
}
func (dst *StreamVariantsResponse) XXX_Merge(src proto.Message) {
	xxx_messageInfo_StreamVariantsResponse.Merge(dst, src)
}
func (m *StreamVariantsResponse) XXX_Size() int {
	return xxx_messageInfo_StreamVariantsResponse.Size(m)
}
func (m *StreamVariantsResponse) XXX_DiscardUnknown() {
	xxx_messageInfo_StreamVariantsResponse.DiscardUnknown(m)
}

var xxx_messageInfo_StreamVariantsResponse proto.InternalMessageInfo

func (m *StreamVariantsResponse) GetVariants() []*Variant {
	if m != nil {
		return m.Variants
	}
	return nil
}

func init() {
	proto.RegisterType((*VariantSetMetadata)(nil), "google.genomics.v1.VariantSetMetadata")
	proto.RegisterMapType((map[string]*_struct.ListValue)(nil), "google.genomics.v1.VariantSetMetadata.InfoEntry")
	proto.RegisterType((*VariantSet)(nil), "google.genomics.v1.VariantSet")
	proto.RegisterType((*Variant)(nil), "google.genomics.v1.Variant")
	proto.RegisterMapType((map[string]*_struct.ListValue)(nil), "google.genomics.v1.Variant.InfoEntry")
	proto.RegisterType((*VariantCall)(nil), "google.genomics.v1.VariantCall")
	proto.RegisterMapType((map[string]*_struct.ListValue)(nil), "google.genomics.v1.VariantCall.InfoEntry")
	proto.RegisterType((*CallSet)(nil), "google.genomics.v1.CallSet")
	proto.RegisterMapType((map[string]*_struct.ListValue)(nil), "google.genomics.v1.CallSet.InfoEntry")
	proto.RegisterType((*ReferenceBound)(nil), "google.genomics.v1.ReferenceBound")
	proto.RegisterType((*ImportVariantsRequest)(nil), "google.genomics.v1.ImportVariantsRequest")
	proto.RegisterMapType((map[string]InfoMergeOperation)(nil), "google.genomics.v1.ImportVariantsRequest.InfoMergeConfigEntry")
	proto.RegisterType((*ImportVariantsResponse)(nil), "google.genomics.v1.ImportVariantsResponse")
	proto.RegisterType((*CreateVariantSetRequest)(nil), "google.genomics.v1.CreateVariantSetRequest")
	proto.RegisterType((*ExportVariantSetRequest)(nil), "google.genomics.v1.ExportVariantSetRequest")
	proto.RegisterType((*GetVariantSetRequest)(nil), "google.genomics.v1.GetVariantSetRequest")
	proto.RegisterType((*SearchVariantSetsRequest)(nil), "google.genomics.v1.SearchVariantSetsRequest")
	proto.RegisterType((*SearchVariantSetsResponse)(nil), "google.genomics.v1.SearchVariantSetsResponse")
	proto.RegisterType((*DeleteVariantSetRequest)(nil), "google.genomics.v1.DeleteVariantSetRequest")
	proto.RegisterType((*UpdateVariantSetRequest)(nil), "google.genomics.v1.UpdateVariantSetRequest")
	proto.RegisterType((*SearchVariantsRequest)(nil), "google.genomics.v1.SearchVariantsRequest")
	proto.RegisterType((*SearchVariantsResponse)(nil), "google.genomics.v1.SearchVariantsResponse")
	proto.RegisterType((*CreateVariantRequest)(nil), "google.genomics.v1.CreateVariantRequest")
	proto.RegisterType((*UpdateVariantRequest)(nil), "google.genomics.v1.UpdateVariantRequest")
	proto.RegisterType((*DeleteVariantRequest)(nil), "google.genomics.v1.DeleteVariantRequest")
	proto.RegisterType((*GetVariantRequest)(nil), "google.genomics.v1.GetVariantRequest")
	proto.RegisterType((*MergeVariantsRequest)(nil), "google.genomics.v1.MergeVariantsRequest")
	proto.RegisterMapType((map[string]InfoMergeOperation)(nil), "google.genomics.v1.MergeVariantsRequest.InfoMergeConfigEntry")
	proto.RegisterType((*SearchCallSetsRequest)(nil), "google.genomics.v1.SearchCallSetsRequest")
	proto.RegisterType((*SearchCallSetsResponse)(nil), "google.genomics.v1.SearchCallSetsResponse")
	proto.RegisterType((*CreateCallSetRequest)(nil), "google.genomics.v1.CreateCallSetRequest")
	proto.RegisterType((*UpdateCallSetRequest)(nil), "google.genomics.v1.UpdateCallSetRequest")
	proto.RegisterType((*DeleteCallSetRequest)(nil), "google.genomics.v1.DeleteCallSetRequest")
	proto.RegisterType((*GetCallSetRequest)(nil), "google.genomics.v1.GetCallSetRequest")
	proto.RegisterType((*StreamVariantsRequest)(nil), "google.genomics.v1.StreamVariantsRequest")
	proto.RegisterType((*StreamVariantsResponse)(nil), "google.genomics.v1.StreamVariantsResponse")
	proto.RegisterEnum("google.genomics.v1.InfoMergeOperation", InfoMergeOperation_name, InfoMergeOperation_value)
	proto.RegisterEnum("google.genomics.v1.VariantSetMetadata_Type", VariantSetMetadata_Type_name, VariantSetMetadata_Type_value)
	proto.RegisterEnum("google.genomics.v1.ImportVariantsRequest_Format", ImportVariantsRequest_Format_name, ImportVariantsRequest_Format_value)
	proto.RegisterEnum("google.genomics.v1.ExportVariantSetRequest_Format", ExportVariantSetRequest_Format_name, ExportVariantSetRequest_Format_value)
}

// Reference imports to suppress errors if they are not otherwise used.
var _ context.Context
var _ grpc.ClientConn

// This is a compile-time assertion to ensure that this generated file
// is compatible with the grpc package it is being compiled against.
const _ = grpc.SupportPackageIsVersion4

// StreamingVariantServiceClient is the client API for StreamingVariantService service.
//
// For semantics around ctx use and closing/ending streaming RPCs, please refer to https://godoc.org/google.golang.org/grpc#ClientConn.NewStream.
type StreamingVariantServiceClient interface {
	// Returns a stream of all the variants matching the search request, ordered
	// by reference name, position, and ID.
	StreamVariants(ctx context.Context, in *StreamVariantsRequest, opts ...grpc.CallOption) (StreamingVariantService_StreamVariantsClient, error)
}

type streamingVariantServiceClient struct {
	cc *grpc.ClientConn
}

func NewStreamingVariantServiceClient(cc *grpc.ClientConn) StreamingVariantServiceClient {
	return &streamingVariantServiceClient{cc}
}

func (c *streamingVariantServiceClient) StreamVariants(ctx context.Context, in *StreamVariantsRequest, opts ...grpc.CallOption) (StreamingVariantService_StreamVariantsClient, error) {
	stream, err := c.cc.NewStream(ctx, &_StreamingVariantService_serviceDesc.Streams[0], "/google.genomics.v1.StreamingVariantService/StreamVariants", opts...)
	if err != nil {
		return nil, err
	}
	x := &streamingVariantServiceStreamVariantsClient{stream}
	if err := x.ClientStream.SendMsg(in); err != nil {
		return nil, err
	}
	if err := x.ClientStream.CloseSend(); err != nil {
		return nil, err
	}
	return x, nil
}

type StreamingVariantService_StreamVariantsClient interface {
	Recv() (*StreamVariantsResponse, error)
	grpc.ClientStream
}

type streamingVariantServiceStreamVariantsClient struct {
	grpc.ClientStream
}

func (x *streamingVariantServiceStreamVariantsClient) Recv() (*StreamVariantsResponse, error) {
	m := new(StreamVariantsResponse)
	if err := x.ClientStream.RecvMsg(m); err != nil {
		return nil, err
	}
	return m, nil
}

// StreamingVariantServiceServer is the server API for StreamingVariantService service.
type StreamingVariantServiceServer interface {
	// Returns a stream of all the variants matching the search request, ordered
	// by reference name, position, and ID.
	StreamVariants(*StreamVariantsRequest, StreamingVariantService_StreamVariantsServer) error
}

func RegisterStreamingVariantServiceServer(s *grpc.Server, srv StreamingVariantServiceServer) {
	s.RegisterService(&_StreamingVariantService_serviceDesc, srv)
}

func _StreamingVariantService_StreamVariants_Handler(srv interface{}, stream grpc.ServerStream) error {
	m := new(StreamVariantsRequest)
	if err := stream.RecvMsg(m); err != nil {
		return err
	}
	return srv.(StreamingVariantServiceServer).StreamVariants(m, &streamingVariantServiceStreamVariantsServer{stream})
}

type StreamingVariantService_StreamVariantsServer interface {
	Send(*StreamVariantsResponse) error
	grpc.ServerStream
}

type streamingVariantServiceStreamVariantsServer struct {
	grpc.ServerStream
}

func (x *streamingVariantServiceStreamVariantsServer) Send(m *StreamVariantsResponse) error {
	return x.ServerStream.SendMsg(m)
}

var _StreamingVariantService_serviceDesc = grpc.ServiceDesc{
	ServiceName: "google.genomics.v1.StreamingVariantService",
	HandlerType: (*StreamingVariantServiceServer)(nil),
	Methods:     []grpc.MethodDesc{},
	Streams: []grpc.StreamDesc{
		{
			StreamName:    "StreamVariants",
			Handler:       _StreamingVariantService_StreamVariants_Handler,
			ServerStreams: true,
		},
	},
	Metadata: "google/genomics/v1/variants.proto",
}

// VariantServiceV1Client is the client API for VariantServiceV1 service.
//
// For semantics around ctx use and closing/ending streaming RPCs, please refer to https://godoc.org/google.golang.org/grpc#ClientConn.NewStream.
type VariantServiceV1Client interface {
	// Creates variant data by asynchronously importing the provided information.
	//
	// For the definitions of variant sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// The variants for import will be merged with any existing variant that
	// matches its reference sequence, start, end, reference bases, and
	// alternative bases. If no such variant exists, a new one will be created.
	//
	// When variants are merged, the call information from the new variant
	// is added to the existing variant, and Variant info fields are merged
	// as specified in
	// [infoMergeConfig][google.genomics.v1.ImportVariantsRequest.info_merge_config].
	// As a special case, for single-sample VCF files, QUAL and FILTER fields will
	// be moved to the call level; these are sometimes interpreted in a
	// call-specific context.
	// Imported VCF headers are appended to the metadata already in a variant set.
	ImportVariants(ctx context.Context, in *ImportVariantsRequest, opts ...grpc.CallOption) (*longrunning.Operation, error)
	// Creates a new variant set.
	//
	// For the definitions of variant sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// The provided variant set must have a valid `datasetId` set - all other
	// fields are optional. Note that the `id` field will be ignored, as this is
	// assigned by the server.
	CreateVariantSet(ctx context.Context, in *CreateVariantSetRequest, opts ...grpc.CallOption) (*VariantSet, error)
	// Exports variant set data to an external destination.
	//
	// For the definitions of variant sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	ExportVariantSet(ctx context.Context, in *ExportVariantSetRequest, opts ...grpc.CallOption) (*longrunning.Operation, error)
	// Gets a variant set by ID.
	//
	// For the definitions of variant sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	GetVariantSet(ctx context.Context, in *GetVariantSetRequest, opts ...grpc.CallOption) (*VariantSet, error)
	// Returns a list of all variant sets matching search criteria.
	//
	// For the definitions of variant sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// Implements
	// [GlobalAllianceApi.searchVariantSets](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variantmethods.avdl#L49).
	SearchVariantSets(ctx context.Context, in *SearchVariantSetsRequest, opts ...grpc.CallOption) (*SearchVariantSetsResponse, error)
	// Deletes a variant set including all variants, call sets, and calls within.
	// This is not reversible.
	//
	// For the definitions of variant sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	DeleteVariantSet(ctx context.Context, in *DeleteVariantSetRequest, opts ...grpc.CallOption) (*empty.Empty, error)
	// Updates a variant set using patch semantics.
	//
	// For the definitions of variant sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	UpdateVariantSet(ctx context.Context, in *UpdateVariantSetRequest, opts ...grpc.CallOption) (*VariantSet, error)
	// Gets a list of variants matching the criteria.
	//
	// For the definitions of variants and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// Implements
	// [GlobalAllianceApi.searchVariants](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variantmethods.avdl#L126).
	SearchVariants(ctx context.Context, in *SearchVariantsRequest, opts ...grpc.CallOption) (*SearchVariantsResponse, error)
	// Creates a new variant.
	//
	// For the definitions of variants and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	CreateVariant(ctx context.Context, in *CreateVariantRequest, opts ...grpc.CallOption) (*Variant, error)
	// Updates a variant.
	//
	// For the definitions of variants and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// This method supports patch semantics. Returns the modified variant without
	// its calls.
	UpdateVariant(ctx context.Context, in *UpdateVariantRequest, opts ...grpc.CallOption) (*Variant, error)
	// Deletes a variant.
	//
	// For the definitions of variants and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	DeleteVariant(ctx context.Context, in *DeleteVariantRequest, opts ...grpc.CallOption) (*empty.Empty, error)
	// Gets a variant by ID.
	//
	// For the definitions of variants and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	GetVariant(ctx context.Context, in *GetVariantRequest, opts ...grpc.CallOption) (*Variant, error)
	// Merges the given variants with existing variants.
	//
	// For the definitions of variants and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// Each variant will be
	// merged with an existing variant that matches its reference sequence,
	// start, end, reference bases, and alternative bases. If no such variant
	// exists, a new one will be created.
	//
	// When variants are merged, the call information from the new variant
	// is added to the existing variant. Variant info fields are merged as
	// specified in the
	// [infoMergeConfig][google.genomics.v1.MergeVariantsRequest.info_merge_config]
	// field of the MergeVariantsRequest.
	//
	// Please exercise caution when using this method!  It is easy to introduce
	// mistakes in existing variants and difficult to back out of them.  For
	// example,
	// suppose you were trying to merge a new variant with an existing one and
	// both
	// variants contain calls that belong to callsets with the same callset ID.
	//
	//     // Existing variant - irrelevant fields trimmed for clarity
	//     {
	//         "variantSetId": "10473108253681171589",
	//         "referenceName": "1",
	//         "start": "10582",
	//         "referenceBases": "G",
	//         "alternateBases": [
	//             "A"
	//         ],
	//         "calls": [
	//             {
	//                 "callSetId": "10473108253681171589-0",
	//                 "callSetName": "CALLSET0",
	//                 "genotype": [
	//                     0,
	//                     1
	//                 ],
	//             }
	//         ]
	//     }
	//
	//     // New variant with conflicting call information
	//     {
	//         "variantSetId": "10473108253681171589",
	//         "referenceName": "1",
	//         "start": "10582",
	//         "referenceBases": "G",
	//         "alternateBases": [
	//             "A"
	//         ],
	//         "calls": [
	//             {
	//                 "callSetId": "10473108253681171589-0",
	//                 "callSetName": "CALLSET0",
	//                 "genotype": [
	//                     1,
	//                     1
	//                 ],
	//             }
	//         ]
	//     }
	//
	// The resulting merged variant would overwrite the existing calls with those
	// from the new variant:
	//
	//     {
	//         "variantSetId": "10473108253681171589",
	//         "referenceName": "1",
	//         "start": "10582",
	//         "referenceBases": "G",
	//         "alternateBases": [
	//             "A"
	//         ],
	//         "calls": [
	//             {
	//                 "callSetId": "10473108253681171589-0",
	//                 "callSetName": "CALLSET0",
	//                 "genotype": [
	//                     1,
	//                     1
	//                 ],
	//             }
	//         ]
	//     }
	//
	// This may be the desired outcome, but it is up to the user to determine if
	// if that is indeed the case.
	MergeVariants(ctx context.Context, in *MergeVariantsRequest, opts ...grpc.CallOption) (*empty.Empty, error)
	// Gets a list of call sets matching the criteria.
	//
	// For the definitions of call sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// Implements
	// [GlobalAllianceApi.searchCallSets](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variantmethods.avdl#L178).
	SearchCallSets(ctx context.Context, in *SearchCallSetsRequest, opts ...grpc.CallOption) (*SearchCallSetsResponse, error)
	// Creates a new call set.
	//
	// For the definitions of call sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	CreateCallSet(ctx context.Context, in *CreateCallSetRequest, opts ...grpc.CallOption) (*CallSet, error)
	// Updates a call set.
	//
	// For the definitions of call sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// This method supports patch semantics.
	UpdateCallSet(ctx context.Context, in *UpdateCallSetRequest, opts ...grpc.CallOption) (*CallSet, error)
	// Deletes a call set.
	//
	// For the definitions of call sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	DeleteCallSet(ctx context.Context, in *DeleteCallSetRequest, opts ...grpc.CallOption) (*empty.Empty, error)
	// Gets a call set by ID.
	//
	// For the definitions of call sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	GetCallSet(ctx context.Context, in *GetCallSetRequest, opts ...grpc.CallOption) (*CallSet, error)
}

type variantServiceV1Client struct {
	cc *grpc.ClientConn
}

func NewVariantServiceV1Client(cc *grpc.ClientConn) VariantServiceV1Client {
	return &variantServiceV1Client{cc}
}

func (c *variantServiceV1Client) ImportVariants(ctx context.Context, in *ImportVariantsRequest, opts ...grpc.CallOption) (*longrunning.Operation, error) {
	out := new(longrunning.Operation)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/ImportVariants", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) CreateVariantSet(ctx context.Context, in *CreateVariantSetRequest, opts ...grpc.CallOption) (*VariantSet, error) {
	out := new(VariantSet)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/CreateVariantSet", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) ExportVariantSet(ctx context.Context, in *ExportVariantSetRequest, opts ...grpc.CallOption) (*longrunning.Operation, error) {
	out := new(longrunning.Operation)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/ExportVariantSet", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) GetVariantSet(ctx context.Context, in *GetVariantSetRequest, opts ...grpc.CallOption) (*VariantSet, error) {
	out := new(VariantSet)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/GetVariantSet", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) SearchVariantSets(ctx context.Context, in *SearchVariantSetsRequest, opts ...grpc.CallOption) (*SearchVariantSetsResponse, error) {
	out := new(SearchVariantSetsResponse)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/SearchVariantSets", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) DeleteVariantSet(ctx context.Context, in *DeleteVariantSetRequest, opts ...grpc.CallOption) (*empty.Empty, error) {
	out := new(empty.Empty)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/DeleteVariantSet", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) UpdateVariantSet(ctx context.Context, in *UpdateVariantSetRequest, opts ...grpc.CallOption) (*VariantSet, error) {
	out := new(VariantSet)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/UpdateVariantSet", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) SearchVariants(ctx context.Context, in *SearchVariantsRequest, opts ...grpc.CallOption) (*SearchVariantsResponse, error) {
	out := new(SearchVariantsResponse)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/SearchVariants", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) CreateVariant(ctx context.Context, in *CreateVariantRequest, opts ...grpc.CallOption) (*Variant, error) {
	out := new(Variant)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/CreateVariant", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) UpdateVariant(ctx context.Context, in *UpdateVariantRequest, opts ...grpc.CallOption) (*Variant, error) {
	out := new(Variant)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/UpdateVariant", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) DeleteVariant(ctx context.Context, in *DeleteVariantRequest, opts ...grpc.CallOption) (*empty.Empty, error) {
	out := new(empty.Empty)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/DeleteVariant", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) GetVariant(ctx context.Context, in *GetVariantRequest, opts ...grpc.CallOption) (*Variant, error) {
	out := new(Variant)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/GetVariant", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) MergeVariants(ctx context.Context, in *MergeVariantsRequest, opts ...grpc.CallOption) (*empty.Empty, error) {
	out := new(empty.Empty)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/MergeVariants", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) SearchCallSets(ctx context.Context, in *SearchCallSetsRequest, opts ...grpc.CallOption) (*SearchCallSetsResponse, error) {
	out := new(SearchCallSetsResponse)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/SearchCallSets", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) CreateCallSet(ctx context.Context, in *CreateCallSetRequest, opts ...grpc.CallOption) (*CallSet, error) {
	out := new(CallSet)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/CreateCallSet", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) UpdateCallSet(ctx context.Context, in *UpdateCallSetRequest, opts ...grpc.CallOption) (*CallSet, error) {
	out := new(CallSet)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/UpdateCallSet", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) DeleteCallSet(ctx context.Context, in *DeleteCallSetRequest, opts ...grpc.CallOption) (*empty.Empty, error) {
	out := new(empty.Empty)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/DeleteCallSet", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

func (c *variantServiceV1Client) GetCallSet(ctx context.Context, in *GetCallSetRequest, opts ...grpc.CallOption) (*CallSet, error) {
	out := new(CallSet)
	err := c.cc.Invoke(ctx, "/google.genomics.v1.VariantServiceV1/GetCallSet", in, out, opts...)
	if err != nil {
		return nil, err
	}
	return out, nil
}

// VariantServiceV1Server is the server API for VariantServiceV1 service.
type VariantServiceV1Server interface {
	// Creates variant data by asynchronously importing the provided information.
	//
	// For the definitions of variant sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// The variants for import will be merged with any existing variant that
	// matches its reference sequence, start, end, reference bases, and
	// alternative bases. If no such variant exists, a new one will be created.
	//
	// When variants are merged, the call information from the new variant
	// is added to the existing variant, and Variant info fields are merged
	// as specified in
	// [infoMergeConfig][google.genomics.v1.ImportVariantsRequest.info_merge_config].
	// As a special case, for single-sample VCF files, QUAL and FILTER fields will
	// be moved to the call level; these are sometimes interpreted in a
	// call-specific context.
	// Imported VCF headers are appended to the metadata already in a variant set.
	ImportVariants(context.Context, *ImportVariantsRequest) (*longrunning.Operation, error)
	// Creates a new variant set.
	//
	// For the definitions of variant sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// The provided variant set must have a valid `datasetId` set - all other
	// fields are optional. Note that the `id` field will be ignored, as this is
	// assigned by the server.
	CreateVariantSet(context.Context, *CreateVariantSetRequest) (*VariantSet, error)
	// Exports variant set data to an external destination.
	//
	// For the definitions of variant sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	ExportVariantSet(context.Context, *ExportVariantSetRequest) (*longrunning.Operation, error)
	// Gets a variant set by ID.
	//
	// For the definitions of variant sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	GetVariantSet(context.Context, *GetVariantSetRequest) (*VariantSet, error)
	// Returns a list of all variant sets matching search criteria.
	//
	// For the definitions of variant sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// Implements
	// [GlobalAllianceApi.searchVariantSets](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variantmethods.avdl#L49).
	SearchVariantSets(context.Context, *SearchVariantSetsRequest) (*SearchVariantSetsResponse, error)
	// Deletes a variant set including all variants, call sets, and calls within.
	// This is not reversible.
	//
	// For the definitions of variant sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	DeleteVariantSet(context.Context, *DeleteVariantSetRequest) (*empty.Empty, error)
	// Updates a variant set using patch semantics.
	//
	// For the definitions of variant sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	UpdateVariantSet(context.Context, *UpdateVariantSetRequest) (*VariantSet, error)
	// Gets a list of variants matching the criteria.
	//
	// For the definitions of variants and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// Implements
	// [GlobalAllianceApi.searchVariants](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variantmethods.avdl#L126).
	SearchVariants(context.Context, *SearchVariantsRequest) (*SearchVariantsResponse, error)
	// Creates a new variant.
	//
	// For the definitions of variants and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	CreateVariant(context.Context, *CreateVariantRequest) (*Variant, error)
	// Updates a variant.
	//
	// For the definitions of variants and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// This method supports patch semantics. Returns the modified variant without
	// its calls.
	UpdateVariant(context.Context, *UpdateVariantRequest) (*Variant, error)
	// Deletes a variant.
	//
	// For the definitions of variants and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	DeleteVariant(context.Context, *DeleteVariantRequest) (*empty.Empty, error)
	// Gets a variant by ID.
	//
	// For the definitions of variants and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	GetVariant(context.Context, *GetVariantRequest) (*Variant, error)
	// Merges the given variants with existing variants.
	//
	// For the definitions of variants and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// Each variant will be
	// merged with an existing variant that matches its reference sequence,
	// start, end, reference bases, and alternative bases. If no such variant
	// exists, a new one will be created.
	//
	// When variants are merged, the call information from the new variant
	// is added to the existing variant. Variant info fields are merged as
	// specified in the
	// [infoMergeConfig][google.genomics.v1.MergeVariantsRequest.info_merge_config]
	// field of the MergeVariantsRequest.
	//
	// Please exercise caution when using this method!  It is easy to introduce
	// mistakes in existing variants and difficult to back out of them.  For
	// example,
	// suppose you were trying to merge a new variant with an existing one and
	// both
	// variants contain calls that belong to callsets with the same callset ID.
	//
	//     // Existing variant - irrelevant fields trimmed for clarity
	//     {
	//         "variantSetId": "10473108253681171589",
	//         "referenceName": "1",
	//         "start": "10582",
	//         "referenceBases": "G",
	//         "alternateBases": [
	//             "A"
	//         ],
	//         "calls": [
	//             {
	//                 "callSetId": "10473108253681171589-0",
	//                 "callSetName": "CALLSET0",
	//                 "genotype": [
	//                     0,
	//                     1
	//                 ],
	//             }
	//         ]
	//     }
	//
	//     // New variant with conflicting call information
	//     {
	//         "variantSetId": "10473108253681171589",
	//         "referenceName": "1",
	//         "start": "10582",
	//         "referenceBases": "G",
	//         "alternateBases": [
	//             "A"
	//         ],
	//         "calls": [
	//             {
	//                 "callSetId": "10473108253681171589-0",
	//                 "callSetName": "CALLSET0",
	//                 "genotype": [
	//                     1,
	//                     1
	//                 ],
	//             }
	//         ]
	//     }
	//
	// The resulting merged variant would overwrite the existing calls with those
	// from the new variant:
	//
	//     {
	//         "variantSetId": "10473108253681171589",
	//         "referenceName": "1",
	//         "start": "10582",
	//         "referenceBases": "G",
	//         "alternateBases": [
	//             "A"
	//         ],
	//         "calls": [
	//             {
	//                 "callSetId": "10473108253681171589-0",
	//                 "callSetName": "CALLSET0",
	//                 "genotype": [
	//                     1,
	//                     1
	//                 ],
	//             }
	//         ]
	//     }
	//
	// This may be the desired outcome, but it is up to the user to determine if
	// if that is indeed the case.
	MergeVariants(context.Context, *MergeVariantsRequest) (*empty.Empty, error)
	// Gets a list of call sets matching the criteria.
	//
	// For the definitions of call sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// Implements
	// [GlobalAllianceApi.searchCallSets](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variantmethods.avdl#L178).
	SearchCallSets(context.Context, *SearchCallSetsRequest) (*SearchCallSetsResponse, error)
	// Creates a new call set.
	//
	// For the definitions of call sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	CreateCallSet(context.Context, *CreateCallSetRequest) (*CallSet, error)
	// Updates a call set.
	//
	// For the definitions of call sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	//
	// This method supports patch semantics.
	UpdateCallSet(context.Context, *UpdateCallSetRequest) (*CallSet, error)
	// Deletes a call set.
	//
	// For the definitions of call sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	DeleteCallSet(context.Context, *DeleteCallSetRequest) (*empty.Empty, error)
	// Gets a call set by ID.
	//
	// For the definitions of call sets and other genomics resources, see
	// [Fundamentals of Google
	// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	GetCallSet(context.Context, *GetCallSetRequest) (*CallSet, error)
}

func RegisterVariantServiceV1Server(s *grpc.Server, srv VariantServiceV1Server) {
	s.RegisterService(&_VariantServiceV1_serviceDesc, srv)
}

func _VariantServiceV1_ImportVariants_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(ImportVariantsRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).ImportVariants(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/ImportVariants",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).ImportVariants(ctx, req.(*ImportVariantsRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_CreateVariantSet_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(CreateVariantSetRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).CreateVariantSet(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/CreateVariantSet",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).CreateVariantSet(ctx, req.(*CreateVariantSetRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_ExportVariantSet_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(ExportVariantSetRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).ExportVariantSet(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/ExportVariantSet",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).ExportVariantSet(ctx, req.(*ExportVariantSetRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_GetVariantSet_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(GetVariantSetRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).GetVariantSet(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/GetVariantSet",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).GetVariantSet(ctx, req.(*GetVariantSetRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_SearchVariantSets_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(SearchVariantSetsRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).SearchVariantSets(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/SearchVariantSets",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).SearchVariantSets(ctx, req.(*SearchVariantSetsRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_DeleteVariantSet_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(DeleteVariantSetRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).DeleteVariantSet(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/DeleteVariantSet",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).DeleteVariantSet(ctx, req.(*DeleteVariantSetRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_UpdateVariantSet_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(UpdateVariantSetRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).UpdateVariantSet(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/UpdateVariantSet",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).UpdateVariantSet(ctx, req.(*UpdateVariantSetRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_SearchVariants_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(SearchVariantsRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).SearchVariants(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/SearchVariants",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).SearchVariants(ctx, req.(*SearchVariantsRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_CreateVariant_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(CreateVariantRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).CreateVariant(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/CreateVariant",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).CreateVariant(ctx, req.(*CreateVariantRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_UpdateVariant_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(UpdateVariantRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).UpdateVariant(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/UpdateVariant",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).UpdateVariant(ctx, req.(*UpdateVariantRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_DeleteVariant_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(DeleteVariantRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).DeleteVariant(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/DeleteVariant",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).DeleteVariant(ctx, req.(*DeleteVariantRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_GetVariant_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(GetVariantRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).GetVariant(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/GetVariant",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).GetVariant(ctx, req.(*GetVariantRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_MergeVariants_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(MergeVariantsRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).MergeVariants(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/MergeVariants",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).MergeVariants(ctx, req.(*MergeVariantsRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_SearchCallSets_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(SearchCallSetsRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).SearchCallSets(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/SearchCallSets",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).SearchCallSets(ctx, req.(*SearchCallSetsRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_CreateCallSet_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(CreateCallSetRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).CreateCallSet(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/CreateCallSet",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).CreateCallSet(ctx, req.(*CreateCallSetRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_UpdateCallSet_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(UpdateCallSetRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).UpdateCallSet(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/UpdateCallSet",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).UpdateCallSet(ctx, req.(*UpdateCallSetRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_DeleteCallSet_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(DeleteCallSetRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).DeleteCallSet(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/DeleteCallSet",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).DeleteCallSet(ctx, req.(*DeleteCallSetRequest))
	}
	return interceptor(ctx, in, info, handler)
}

func _VariantServiceV1_GetCallSet_Handler(srv interface{}, ctx context.Context, dec func(interface{}) error, interceptor grpc.UnaryServerInterceptor) (interface{}, error) {
	in := new(GetCallSetRequest)
	if err := dec(in); err != nil {
		return nil, err
	}
	if interceptor == nil {
		return srv.(VariantServiceV1Server).GetCallSet(ctx, in)
	}
	info := &grpc.UnaryServerInfo{
		Server:     srv,
		FullMethod: "/google.genomics.v1.VariantServiceV1/GetCallSet",
	}
	handler := func(ctx context.Context, req interface{}) (interface{}, error) {
		return srv.(VariantServiceV1Server).GetCallSet(ctx, req.(*GetCallSetRequest))
	}
	return interceptor(ctx, in, info, handler)
}

var _VariantServiceV1_serviceDesc = grpc.ServiceDesc{
	ServiceName: "google.genomics.v1.VariantServiceV1",
	HandlerType: (*VariantServiceV1Server)(nil),
	Methods: []grpc.MethodDesc{
		{
			MethodName: "ImportVariants",
			Handler:    _VariantServiceV1_ImportVariants_Handler,
		},
		{
			MethodName: "CreateVariantSet",
			Handler:    _VariantServiceV1_CreateVariantSet_Handler,
		},
		{
			MethodName: "ExportVariantSet",
			Handler:    _VariantServiceV1_ExportVariantSet_Handler,
		},
		{
			MethodName: "GetVariantSet",
			Handler:    _VariantServiceV1_GetVariantSet_Handler,
		},
		{
			MethodName: "SearchVariantSets",
			Handler:    _VariantServiceV1_SearchVariantSets_Handler,
		},
		{
			MethodName: "DeleteVariantSet",
			Handler:    _VariantServiceV1_DeleteVariantSet_Handler,
		},
		{
			MethodName: "UpdateVariantSet",
			Handler:    _VariantServiceV1_UpdateVariantSet_Handler,
		},
		{
			MethodName: "SearchVariants",
			Handler:    _VariantServiceV1_SearchVariants_Handler,
		},
		{
			MethodName: "CreateVariant",
			Handler:    _VariantServiceV1_CreateVariant_Handler,
		},
		{
			MethodName: "UpdateVariant",
			Handler:    _VariantServiceV1_UpdateVariant_Handler,
		},
		{
			MethodName: "DeleteVariant",
			Handler:    _VariantServiceV1_DeleteVariant_Handler,
		},
		{
			MethodName: "GetVariant",
			Handler:    _VariantServiceV1_GetVariant_Handler,
		},
		{
			MethodName: "MergeVariants",
			Handler:    _VariantServiceV1_MergeVariants_Handler,
		},
		{
			MethodName: "SearchCallSets",
			Handler:    _VariantServiceV1_SearchCallSets_Handler,
		},
		{
			MethodName: "CreateCallSet",
			Handler:    _VariantServiceV1_CreateCallSet_Handler,
		},
		{
			MethodName: "UpdateCallSet",
			Handler:    _VariantServiceV1_UpdateCallSet_Handler,
		},
		{
			MethodName: "DeleteCallSet",
			Handler:    _VariantServiceV1_DeleteCallSet_Handler,
		},
		{
			MethodName: "GetCallSet",
			Handler:    _VariantServiceV1_GetCallSet_Handler,
		},
	},
	Streams:  []grpc.StreamDesc{},
	Metadata: "google/genomics/v1/variants.proto",
}

func init() {
	proto.RegisterFile("google/genomics/v1/variants.proto", fileDescriptor_variants_9857dc8060ef8f89)
}

var fileDescriptor_variants_9857dc8060ef8f89 = []byte{
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